RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CCDC54Q8NEL0 328 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 OR7D4Q8NG98 312 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 OR56A3Q8NH54 315 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ARNTL2Q8WYA1 636 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 FCRL2Q96LA5 508 aaPredicted RBP4.75□□□□□ -1.65
SKP1-202ENST00000353411 OR5M11Q96RB7 305 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 NMNAT1Q9HAN9 279 aaPredicted RBP4.75□□□□□ -1.65
SKP1-202ENST00000353411 PTGDR2Q9Y5Y4 395 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 LTBP3Q9NS15 1303 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 PPP5D1E7EU14 171 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 GPR39O43194 453 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 KDELR3O43731 214 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 MFSD13AQ14CX5 517 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 SAPCD1Q5SSQ6 148 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 NOXRED1Q6NXP6 359 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ISCA2Q86U28 154 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 JAGN1Q8N5M9 183 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ARRDC4Q8NCT1 418 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 OR52E4Q8NGH9 312 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 PHYHIPQ92561 330 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 RNF170Q96K19 258 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 PEBP4Q96S96 227 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 WWTR1Q9GZV5 400 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 TDRD3Q9H7E2 651 aaKnown RBP4.75□□□□□ -1.65
SKP1-202ENST00000353411 PLEKHA1Q9HB21 404 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 MED31Q9Y3C7 131 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ANKRD36CQ5JPF3 1778 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 LOC390937A0A1W2PQ73 354 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ZNF729A6NN14 1252 aaPredicted RBP4.75□□□□□ -1.65
SKP1-202ENST00000353411 K7ERU9 68 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ADAMTS3O15072 1205 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 FGF18O76093 207 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 CRYBA1P05813 215 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 GAAP10253 952 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 HRH2P25021 359 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 SLC6A6P31641 620 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ACVR1BP36896 505 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 NSG1P42857 185 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 NDUFV1P49821 464 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 RAB11BQ15907 218 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.75□□□□□ -1.657e-8■■■■■ 40
SKP1-202ENST00000353411 METTL7BQ6UX53 244 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 CHRDL2Q6WN34 429 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 REC114Q7Z4M0 266 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 MRPL10Q7Z7H8 261 aaKnown RBP4.75□□□□□ -1.65
SKP1-202ENST00000353411 ARHGAP12Q8IWW6 846 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ZNF383Q8NA42 475 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 OR51D1Q8NGF3 324 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 POC1BQ8TC44 478 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 ZNF354BQ96LW1 612 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 CHRDQ9H2X0 955 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 LAMB4A4D0S4 1761 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 PEAK1Q9H792 1746 aa4.75□□□□□ -1.65
SKP1-202ENST00000353411 CHD5Q8TDI0 1954 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ZCWPW2A0A1B0GU75 182 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TMEM129A0AVI4 362 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TMEM210A6NLX4 147 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 M0R129 80 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SLC33A1O00400 549 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 ZNF623O75123 536 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SLC25A12O75746 678 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 JTBO76095 146 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RENP00797 406 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ATP1B1P05026 303 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PIRTP0C851 137 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SFTPCP11686 197 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 DPEP1P16444 411 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RHOQP17081 205 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 DDTP30046 118 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 GATMP50440 423 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PIN1Q13526 163 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 HLXQ14774 488 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 TMEM183BQ1AE95 376 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 BEX5Q5H9J7 111 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 FAM109BQ6ICB4 259 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 FIGNL1Q6PIW4 674 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 CNTN4Q8IWV2 1026 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 NANOGP1Q8N7R0 232 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ZNF709Q8N972 641 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PXYLP1Q8TE99 480 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 BPIFA1Q9NP55 256 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 DLL4Q9NR61 685 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TMPRSS4Q9NRS4 437 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RHCGQ9UBD6 479 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 LAMP5Q9UJQ1 280 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 AGO1Q9UL18 857 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 RIPK3Q9Y572 518 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RAI2Q9Y5P3 530 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 H3BQ06 376 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 BPIP17213 487 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 HSPB3Q12988 150 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SMAD4Q13485 552 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 PDZD11Q5EBL8 140 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 C12orf40Q86WS4 652 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 FUNDC1Q8IVP5 155 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 OR4M1Q8NGD0 313 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 OR9Q2Q8NGE9 314 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RAB24Q969Q5 203 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ADAD1Q96M93 576 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 SORCS2Q96PQ0 1159 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms