RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 UBE2J2Q8N2K1 259 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 TTC29Q8NA56 475 aaPredicted RBP12.17□□□□□ -0.46
CD74-202ENST00000353334 TRPV3Q8NET8 790 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 OR5K2Q8NHB8 316 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 NRGNQ92686 78 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 YIPF5Q969M3 257 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 YIPF6Q96EC8 236 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 ZHX1-C8orf76Q96EF9 292 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 WDR34Q96EX3 536 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 TEX37Q96LM6 180 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 TTYH2Q9BSA4 534 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 UCK2Q9BZX2 261 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 SPNS1Q9H2V7 528 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 ALG2Q9H553 416 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 GMPR2Q9P2T1 348 aaKnown RBP12.17□□□□□ -0.46
CD74-202ENST00000353334 ENOPH1Q9UHY7 261 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 MAGEL2Q9UJ55 1249 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 PPT2Q9UMR5 302 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 ZNF835Q9Y2P0 537 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 TPRKBQ9Y3C4 175 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 SNX8Q9Y5X2 465 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 HSPE1-MOB4S4R3N1 261 aa12.17□□□□□ -0.46
CD74-202ENST00000353334 IGHV1-45A0A0A0MS14 117 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 MEIOCA2RUB1 952 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 OR5H15A6NDH6 313 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 METTL15A6NJ78 407 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 KRBOX1C9JBD0 128 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ABCD4O14678 606 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 CTSVO60911 334 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ERN1O75460 977 aaKnown RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 TIPRLO75663 272 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 PPM1BO75688 479 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 APOL3O95236 402 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 IL1RNP18510 177 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 DDCP20711 480 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ZP3P21754 424 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 RAB28P51157 221 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 PSMD4P55036 377 aaKnown RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 VSX2P58304 361 aaPredicted RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 CD83Q01151 205 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ZNF267Q14586 743 aaPredicted RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 PAGE3Q5JUK9 113 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 CLLU1Q5K131 121 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 LRIF1Q5T3J3 769 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 YOD1Q5VVQ6 348 aaPredicted RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 GRHL2Q6ISB3 625 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 FIGLAQ6QHK4 219 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 Q6ZPB1 254 aaPredicted RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 SPPL2CQ8IUH8 684 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 VRK3Q8IV63 474 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 P3H2Q8IVL5 708 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 SUN3Q8TAQ9 357 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 SLC13A3Q8WWT9 602 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ART5Q96L15 291 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ZNF285Q96NJ3 590 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 IL17FQ96PD4 163 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 MOGAT1Q96PD6 335 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ZNF300Q96RE9 604 aaPredicted RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 TREX2Q9BQ50 279 aaPredicted RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 SPATA9Q9BWV2 254 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 DPY30Q9C005 99 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ROGDIQ9GZN7 287 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 RNF32Q9H0A6 362 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 USE1Q9NZ43 259 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ZNF224Q9NZL3 707 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 ZNF282Q9UDV7 671 aaPredicted RBP12.16□□□□□ -0.46
CD74-202ENST00000353334 PHF11Q9UIL8 331 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 USP22Q9UPT9 525 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 HRH3Q9Y5N1 445 aa12.16□□□□□ -0.46
CD74-202ENST00000353334 PRRC2AP48634 2157 aaKnown RBP12.15□□□□□ -0.46
CD74-202ENST00000353334 HYKKA2RU49 373 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 FITM1A5D6W6 292 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 ARHGEF33A8MVX0 844 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 SPNP16150 400 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 POLR2IP36954 125 aaKnown RBP12.15□□□□□ -0.46
CD74-202ENST00000353334 GDF5P43026 501 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 GSK3BP49841 420 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 RPL38P63173 70 aaKnown RBP12.15□□□□□ -0.46
CD74-202ENST00000353334 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.15□□□□□ -0.46
CD74-202ENST00000353334 LRRC74AQ0VAA2 488 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 DBPQ10586 325 aaPredicted RBP12.15□□□□□ -0.46
CD74-202ENST00000353334 ZNF273Q14593 569 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 SYTL3Q4VX76 610 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 ZNF766Q5HY98 468 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 TCTE1Q5JU00 501 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 C6orf141Q5SZD1 244 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 SYT6Q5T7P8 510 aaPredicted RBP12.15□□□□□ -0.46
CD74-202ENST00000353334 ABHD17BQ5VST6 288 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 FRG2Q64ET8 278 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 FRMPD2BQ6IN97 320 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 UNC5DQ6UXZ4 953 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 C16orf62Q7Z3J2 963 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 ZBTB46Q86UZ6 589 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 NKAIN4Q8IVV8 208 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 TIGD4Q8IY51 512 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 EID3Q8N140 333 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 RNF148Q8N7C7 305 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 WDR20Q8TBZ3 569 aa12.15□□□□□ -0.46
CD74-202ENST00000353334 UTP15Q8TED0 518 aaKnown RBP12.15□□□□□ -0.46
CD74-202ENST00000353334 SELENOMQ8WWX9 145 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms