RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TREM1Q9NP99 234 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 A0A0A6YYD5 115 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 OR2A25A4D2G3 310 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 NPIPA7E9PJI5 369 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 FXYD1O00168 92 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 NPIPA8P0DM63 369 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 AZGP1P25311 298 aaKnown RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 METAP1P53582 386 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 SSTP61278 116 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 CHRNEQ04844 493 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 EXOSC7Q15024 291 aaKnown RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 OR1Q1Q15612 314 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ARHGAP11BQ3KRB8 267 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ARL9Q6T311 187 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ABI3BPQ7Z7G0 1075 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 GATSQ8NAP1 163 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 OR6N1Q8NGY5 312 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 OR51A7Q8NH64 312 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 MAFAQ8NHW3 353 aaPredicted RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 SMPDL3BQ92485 455 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF337Q9Y3M9 751 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 MAB21L2Q9Y586 359 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 A0A1W2PR48 441 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 CHRNB1P11230 501 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 TNFRSF1BP20333 461 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 GRK5P34947 590 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ELAVL1Q15717 326 aaKnown RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 OR51G2Q8NGK0 314 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 OR5M3Q8NGP4 307 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF431Q8TF32 576 aaPredicted RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ZBTB20Q9HC78 741 aaPredicted RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 SLC6A20Q9NP91 592 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 AASSQ9UDR5 926 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ARRDC5A6NEK1 342 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 FABP12A6NFH5 140 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 PCDH17O14917 1159 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 NARSO43776 548 aaKnown RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 COL9A1P20849 921 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 FNTBP49356 437 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF84P51523 738 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 RPS3AP61247 264 aaKnown RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ILKQ13418 452 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 FGL2Q14314 439 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 NNATQ16517 81 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 DCAF12Q5T6F0 453 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ANKK1Q8NFD2 765 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 SERGEFQ9UGK8 458 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 STUB1Q9UNE7 303 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 FAM25EA8MYX2 175 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 H3BMQ9 156 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 B4GAT1O43505 415 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 FMO6PO60774 539 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 SLC19A2O60779 497 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 CFL1P23528 166 aaKnown RBP11.33□□□□□ -0.6
SMAD9-201ENST00000350148 HSD11B1P28845 292 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 CAPZA1P52907 286 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 CEBPGP53567 150 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 CLRN1P58418 232 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 TRIM61Q5EBN2 209 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 TMEM17Q86X19 198 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 RIMKLAQ8IXN7 391 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 IL22RA1Q8N6P7 574 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 COG8Q96MW5 612 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 SECISBP2Q96T21 854 aaKnown RBP11.33□□□□□ -0.6
SMAD9-201ENST00000350148 SLC25A37Q9NYZ2 338 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 PPIEQ9UNP9 301 aaKnown RBP11.33□□□□□ -0.6
SMAD9-201ENST00000350148 MGAMO43451 1857 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 TMPRSS11DO60235 418 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 SLC35F1Q5T1Q4 408 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 FAM69BQ5VUD6 431 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 PLAG1Q6DJT9 500 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 FAM180BQ6P0A1 224 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 FBXO42Q6P3S6 717 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 BAIAP2L2Q6UXY1 529 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 MBOAT2Q6ZWT7 520 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 TBX5Q99593 518 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 FOXQ1Q9C009 403 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 UCK1Q9HA47 277 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 RXFP3Q9NSD7 469 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 PCOLCE2Q9UKZ9 415 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 KRBA1A5PL33 1030 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 SERINC4A6NH21 518 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 WRBO00258 174 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 DPM1O60762 260 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 ADORA3P0DMS8 318 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF20P17024 532 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 PVALBP20472 110 aaPredicted RBP11.33□□□□□ -0.6
SMAD9-201ENST00000350148 GAB1Q13480 694 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 IHHQ14623 411 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 KIAA0040Q15053 153 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 CLVS2Q5SYC1 327 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 TMEM225Q6GV28 225 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 SHFQ7M4L6 423 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 CALHM3Q86XJ0 350 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 VRK2Q86Y07 508 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 DIO2Q92813 273 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 GPER1Q99527 375 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms