RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CNIH4Q9P003 139 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SRPK3Q9UPE1 567 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 CFL2Q9Y281 166 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM5Q9Y2B1 443 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 LSM2Q9Y333 95 aaKnown RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SPAG17Q6Q759 2223 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 FAM186AA6NE01 2351 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 GOLGA4Q13439 2230 aaKnown RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 CEP192Q8TEP8 1941 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 UNC119BA6NIH7 251 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 A8MU76 341 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 POLR1CO15160 346 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 SURF4O15260 269 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PRODHO43272 600 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 CNOT3O75175 753 aaKnown RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PTP4A3O75365 173 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 BCL10O95999 233 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 HMGN1P05114 100 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ZGLP1P0C6A0 271 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 CD36P16671 472 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 MAKP20794 623 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 TBXA2RP21731 343 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ALAS2P22557 587 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 CSTF2P33240 577 aaKnown RBP eCLIP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 GRK5P34947 590 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 UGT2B10P36537 528 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PGDP52209 483 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 MLLT10P55197 1068 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 DCAF7P61962 342 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 CCL7P80098 99 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 FHL1Q13642 323 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 DOC2BQ14184 412 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 SNAPC1Q16533 368 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM44Q2T9K0 475 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 MINDY4Q4G0A6 757 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ARHGAP40Q5TG30 622 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF385CQ66K41 422 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 RPL13AP3Q6NVV1 102 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 LINC00299Q6ZSB3 139 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 BCDIN3DQ7Z5W3 292 aaKnown RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 SLITRK4Q8IW52 837 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF440Q8IYI8 595 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 SLC43A2Q8N370 569 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF441Q8N8Z8 693 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PROKR2Q8NFJ6 384 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 OR14A16Q8NHC5 309 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PFN4Q8NHR9 129 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 SLC2A12Q8TD20 617 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PIGKQ92643 395 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 NAT6Q93015 286 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM80Q96HE8 168 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 LCORQ96JN0 433 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ART5Q96L15 291 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 LRR1Q96L50 414 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 SLC38A2Q96QD8 506 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 OR5M11Q96RB7 305 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 CCNL2Q96S94 520 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 NUDT9Q9BW91 350 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 TAPBPLQ9BX59 468 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PRRG3Q9BZD7 231 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 VN1R1Q9GZP7 353 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 HOXD1Q9GZZ0 328 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 RACGAP1Q9H0H5 632 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 NXF5Q9H1B4 397 aaKnown RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 UBQLN3Q9H347 655 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 LRRN3Q9H3W5 708 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 HHATLQ9HCP6 504 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 MEPEQ9NQ76 525 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 FSCN3Q9NQT6 498 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PNO1Q9NRX1 252 aaKnown RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 C20orf141Q9NUB4 165 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 TBC1D23Q9NUY8 699 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 TAS2R16Q9NYV7 291 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 FBXO4Q9UKT5 387 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ATXN7L1Q9ULK2 861 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 ICAM5Q9UMF0 924 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 DIMT1Q9UNQ2 313 aaKnown RBP6.37□□□□□ -1.39
TRIM55-203ENST00000350034 SLC35A3Q9Y2D2 325 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 MED31Q9Y3C7 131 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PCDHGA3Q9Y5H0 932 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 SPEGQ15772 3267 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 GON4LQ3T8J9 2241 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 CCDC88CQ9P219 2028 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 THADAQ6YHU6 1953 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 PCDH15Q96QU1 1955 aa6.37□□□□□ -1.39
TRIM55-203ENST00000350034 TNRC6BQ9UPQ9 1833 aaKnown RBP6.36□□□□□ -1.39
TRIM55-203ENST00000350034 RIF1Q5UIP0 2472 aaKnown RBP6.36□□□□□ -1.39
TRIM55-203ENST00000350034 KNL1Q8NG31 2342 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 IGHV5-10-1A0A0J9YXX1 117 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 IRGMA1A4Y4 181 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 CPED1A4D0V7 1026 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 HTR3EA5X5Y0 456 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 OR6C76A6NM76 312 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 PROB1E7EW31 1015 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 BHLHE40O14503 412 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 DYRK3O43781 588 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 RFPL3O75679 317 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 CLPXO76031 633 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 CSTAP01040 98 aa6.36□□□□□ -1.39
TRIM55-203ENST00000350034 IGF2P01344 180 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms