RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 ZMYND19Q96E35 227 aaPredicted RBP13.82□□□□□ -0.2
COPE-202ENST00000349893 PIMREGQ9BSJ6 248 aa13.82□□□□□ -0.2
COPE-202ENST00000349893 EBPLQ9BY08 206 aa13.82□□□□□ -0.2
COPE-202ENST00000349893 VPS11Q9H270 941 aa13.82□□□□□ -0.2
COPE-202ENST00000349893 DPH5Q9H2P9 285 aa13.82□□□□□ -0.2
COPE-202ENST00000349893 UBQLN4Q9NRR5 601 aa13.82□□□□□ -0.2
COPE-202ENST00000349893 NTMQ9P121 344 aa13.82□□□□□ -0.2
COPE-202ENST00000349893 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
COPE-202ENST00000349893 ACTL7BQ9Y614 415 aa13.82□□□□□ -0.2
COPE-202ENST00000349893 SERTM1A2A2V5 107 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 FAM187AA6NFU0 413 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 ZNF195O14628 629 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 CYTIPO60759 359 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 TGFAP01135 160 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 SBK3P0C264 359 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 NTSP30990 170 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 CLCQ05315 142 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 CHRNB3Q05901 458 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 CD226Q15762 336 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 SWI5Q1ZZU3 235 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 TSNAXIP1Q2TAA8 658 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 TMEM176BQ3YBM2 270 aaPredicted RBP13.81□□□□□ -0.2
COPE-202ENST00000349893 VPS26BQ4G0F5 336 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 CDRT4Q8N9R6 151 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 OR6Y1Q8NGX8 325 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 SGMS2Q8NHU3 365 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 SH3YL1Q96HL8 342 aaPredicted RBP13.81□□□□□ -0.2
COPE-202ENST00000349893 ZNF382Q96SR6 550 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 MRPL57Q9BQC6 102 aaKnown RBP13.81□□□□□ -0.2
COPE-202ENST00000349893 MYOZ1Q9NP98 299 aaPredicted RBP13.81□□□□□ -0.2
COPE-202ENST00000349893 WBP11Q9Y2W2 641 aaKnown RBP13.81□□□□□ -0.2
COPE-202ENST00000349893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.81□□□□□ -0.23e-12■□□□□ 9.6
COPE-202ENST00000349893 PMF1-BGLAPU3KQ54 211 aa13.81□□□□□ -0.2
COPE-202ENST00000349893 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 LOC390937A0A1W2PQ73 354 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 A8MT66 165 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 KCNK2O95069 426 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 PRPS2P11908 318 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 ZNF23P17027 643 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 MRPS25P82663 173 aaKnown RBP13.8□□□□□ -0.2
COPE-202ENST00000349893 ZNF117Q03924 483 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 C2orf80Q0P641 193 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 FAM174BQ3ZCQ3 159 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 EXOSC6Q5RKV6 272 aaKnown RBP13.8□□□□□ -0.2
COPE-202ENST00000349893 MMGT1Q8N4V1 131 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 OR2W6PQ8NHA6 318 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 FBXO27Q8NI29 283 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 GIMAP5Q96F15 307 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 SOX7Q9BT81 388 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 MRPL46Q9H2W6 279 aaKnown RBP13.8□□□□□ -0.2
COPE-202ENST00000349893 MYNNQ9NPC7 610 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 ICAM5Q9UMF0 924 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 GPC6Q9Y625 555 aaPredicted RBP13.8□□□□□ -0.2
COPE-202ENST00000349893 FKBP7Q9Y680 259 aa13.8□□□□□ -0.2
COPE-202ENST00000349893 HEATR1Q9H583 2144 aaKnown RBP13.79□□□□□ -0.2
COPE-202ENST00000349893 A0A0A6YYJ9 748 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 IGHV3-15A0A0B4J1V0 119 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 ESYT3A0FGR9 886 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 SLCO1B7G3V0H7 640 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 ETV2O00321 342 aaPredicted RBP13.79□□□□□ -0.2
COPE-202ENST00000349893 APOBEC3AP31941 199 aaPredicted RBP13.79□□□□□ -0.2
COPE-202ENST00000349893 HTR6P50406 440 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 ZNF83P51522 516 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 SUMO3P55854 103 aaPredicted RBP13.79□□□□□ -0.2
COPE-202ENST00000349893 CAV1Q03135 178 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 RASGEF1BQ0VAM2 473 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 MST1LQ2TV78 715 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 SLC25A53Q5H9E4 307 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 FBXW9Q5XUX1 488 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
COPE-202ENST00000349893 GALNT5Q7Z7M9 940 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 SEMA6DQ8NFY4 1073 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 OR52N5Q8NH56 324 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 METTL6Q8TCB7 284 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 FBXO25Q8TCJ0 367 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 MUS81Q96NY9 551 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 FOXN4Q96NZ1 517 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 SORCS2Q96PQ0 1159 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 ZNF300Q96RE9 604 aaPredicted RBP13.79□□□□□ -0.2
COPE-202ENST00000349893 EQTNQ9NQ60 294 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 MIEF1Q9NQG6 463 aa13.79□□□□□ -0.2
COPE-202ENST00000349893 IGKV3D-15A0A087WSY6 115 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 SCDO00767 359 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 RAD51DO75771 328 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 HSPA4LO95757 839 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 ACP2P11117 423 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 HPGDP15428 266 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 PRKCAP17252 672 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 SELENBP1Q13228 472 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 ZSWIM7Q19AV6 140 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 CBLN3Q6UW01 205 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 GPRIN3Q6ZVF9 776 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 IKBIPQ70UQ0 350 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 SLC16A11Q8NCK7 471 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 CEP70Q8NHQ1 597 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 ZNF764Q96H86 408 aaPredicted RBP13.78□□□□□ -0.2
COPE-202ENST00000349893 MRGPRX4Q96LA9 322 aa13.78□□□□□ -0.2
COPE-202ENST00000349893 C12orf65Q9H3J6 166 aaKnown RBP13.78□□□□□ -0.2
COPE-202ENST00000349893 SAR1BQ9Y6B6 198 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms