RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SERHL2Q9H4I8 314 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 NPDC1Q9NQX5 325 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 SERINC1Q9NRX5 453 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 TMEM45AQ9NWC5 275 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 P2RX2Q9UBL9 471 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 INTS1Q8N201 2190 aaKnown RBP14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 MED12Q93074 2177 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 B4DXG7 233 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 NPIPB9F8W1W9 429 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 KIAA0513O60268 411 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 FCMRO60667 390 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 PABPC4LP0CB38 370 aaKnown RBP14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 UBTFL6P0CB48 400 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 CDKN2CP42773 168 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 AGFG1P52594 562 aaKnown RBP14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 CLDN20P56880 219 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 PON3Q15166 354 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 TMEM44Q2T9K0 475 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.21□□□□□ -0.135e-6■■■■□ 22.8
TSPAN4-201ENST00000346501 LILRA2Q8N149 483 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 METTL25Q8N6Q8 603 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 CNEP1R1Q8N9A8 125 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 PNPT1Q8TCS8 783 aaKnown RBP14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 MRGPRX4Q96LA9 322 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 MTHFD2LQ9H903 347 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 ICAM5Q9UMF0 924 aa14.21□□□□□ -0.13
TSPAN4-201ENST00000346501 KDM4EB2RXH2 506 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 SHISA8B8ZZ34 492 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 HMGN4O00479 90 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 UGT2B17O75795 530 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 SASH3O75995 380 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 H6PDO95479 791 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 LINGO3P0C6S8 592 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 TROVE2P10155 538 aaKnown RBP eCLIP14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 UQCRBP14927 111 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 NCF2P19878 526 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 SLC7A1P30825 629 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 KIR2DL3P43628 341 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 MRPL19P49406 292 aaKnown RBP14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 ATP4BP51164 291 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 CTBP2P56545 445 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 TLE4Q04727 773 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 FOXF1Q12946 379 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 SQLEQ14534 574 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 FBXL19-AS1Q494R0 122 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 HBMQ6B0K9 141 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 CBLN3Q6UW01 205 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 LRRC74BQ6ZQY2 392 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 CMIPQ8IY22 773 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 PEX5LQ8IYB4 626 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 RELL2Q8NC24 303 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 OR9I1Q8NGQ6 314 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 OR2V1Q8NHB1 315 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 FBXO27Q8NI29 283 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 ZNF563Q8TA94 476 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 GPR119Q8TDV5 335 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 STON2Q8WXE9 905 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 VPS33AQ96AX1 596 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 ARSGQ96EG1 525 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 KLHL15Q96M94 604 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 EBF4Q9BQW3 602 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 TRIM8Q9BZR9 551 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 SAP130Q9H0E3 1048 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 ARMC7Q9H6L4 198 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 TPT1P8Q9HAU6 139 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 FANCFQ9NPI8 374 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 MRGBPQ9NV56 204 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 CCDC167Q9P0B6 97 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 PACSIN3Q9UKS6 424 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 EMC9Q9Y3B6 208 aa14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 SPIN1Q9Y657 262 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-201ENST00000346501 NR5A2O00482 541 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 SMNDC1O75940 238 aaKnown RBP eCLIP14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 TGM6O95932 706 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 IL7RP16871 459 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 IGFBP2P18065 325 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 CAPN3P20807 821 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 PPIBP23284 216 aaKnown RBP14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 SLC6A8P48029 635 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 RNF144AP50876 292 aaPredicted RBP14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 SUCLG1P53597 346 aaKnown RBP14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 CRISP3P54108 245 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 CARD18P57730 90 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 DSTNP60981 165 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 KCNJ10P78508 379 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 SELENBP1Q13228 472 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 QPRTQ15274 297 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 TYW3Q6IPR3 259 aaKnown RBP14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 ACBD4Q8NC06 268 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 OR10D3Q8NH80 312 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 FNDC9Q8TBE3 224 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 ZFP90Q8TF47 636 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 ST8SIA1Q92185 356 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 SPDL1Q96EA4 605 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 TREX2Q9BQ50 279 aaPredicted RBP14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 THUMPD3Q9BV44 507 aaKnown RBP14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 RBM24Q9BX46 236 aaKnown RBP14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 TMEM185BQ9H7F4 350 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 GLRX2Q9NS18 164 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 ZNF232Q9UNY5 417 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms