RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 PIPP12273 146 aaPredicted RBP23.23■■□□□ 1.31
TRADD-201ENST00000345057 GPR4P46093 362 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 TMBIM6P55061 237 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 ZNF620Q6ZNG0 422 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 SLC34A3Q8N130 599 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 FAM71CQ8NEG0 241 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 B3GNT7Q8NFL0 401 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 EGLN3Q9H6Z9 239 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 RXFP3Q9NSD7 469 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 TBC1D23Q9NUY8 699 aa23.23■■□□□ 1.31
TRADD-201ENST00000345057 ZNF223Q9UK11 482 aaPredicted RBP23.23■■□□□ 1.31
TRADD-201ENST00000345057 RPL36Q9Y3U8 105 aaKnown RBP23.23■■□□□ 1.31
TRADD-201ENST00000345057 UBL4AP11441 157 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 GPR143P51810 404 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 CTBP2P56545 445 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 GPR107Q5VW38 600 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 SHISA6Q6ZSJ9 500 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 TMPRSS11FQ6ZWK6 438 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 CYP4Z2PQ8N1L4 340 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 BMPERQ8N8U9 685 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 C9orf43Q8TAL5 461 aaPredicted RBP23.22■■□□□ 1.31
TRADD-201ENST00000345057 GRHL3Q8TE85 626 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 TP53INP1Q96A56 240 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 LRFN5Q96NI6 719 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 IL4I1Q96RQ9 567 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 DOK1Q99704 481 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 SEMA4CQ9C0C4 833 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 WDR54Q9H977 334 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 ACOT13Q9NPJ3 140 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 FLRT3Q9NZU0 649 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 LNP1A1A4G5 178 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 M0R129 80 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 AGRPO00253 132 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 PIP5K1CO60331 668 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 REM1O75628 298 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 TRMUO75648 421 aaKnown RBP23.22■■□□□ 1.31
TRADD-201ENST00000345057 KLK3P07288 261 aaPredicted RBP23.22■■□□□ 1.31
TRADD-201ENST00000345057 NGFRP08138 427 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 IFI30P13284 250 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 NR0B1P51843 470 aaKnown RBP23.22■■□□□ 1.31
TRADD-201ENST00000345057 PLCXD2Q0VAA5 305 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 TBCEQ15813 527 aaPredicted RBP23.22■■□□□ 1.31
TRADD-201ENST00000345057 SNAPC1Q16533 368 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 FAAH2Q6GMR7 532 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 TCEANCQ8N8B7 351 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 ZNF426Q9BUY5 554 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 MED17Q9NVC6 651 aa23.22■■□□□ 1.31
TRADD-201ENST00000345057 WARS2Q9UGM6 360 aaKnown RBP23.22■■□□□ 1.31
TRADD-201ENST00000345057 GPN3Q9UHW5 284 aaPredicted RBP23.22■■□□□ 1.31
TRADD-201ENST00000345057 PPIEQ9UNP9 301 aaKnown RBP23.22■■□□□ 1.31
TRADD-201ENST00000345057 UNC119BA6NIH7 251 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 FADS2O95864 444 aaKnown RBP23.21■■□□□ 1.31
TRADD-201ENST00000345057 CCKBRP32239 447 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 NUDT6P53370 316 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 PNLIPRP2P54317 469 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 NRG3P56975 720 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 TMEM44Q2T9K0 475 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 SYT6Q5T7P8 510 aaPredicted RBP23.21■■□□□ 1.31
TRADD-201ENST00000345057 FNDC7Q5VTL7 733 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 WDR88Q6ZMY6 472 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 IQCF1Q8N6M8 205 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 ZNF441Q8N8Z8 693 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 RAB2BQ8WUD1 216 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 BPIFA2Q96DR5 249 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 LMF1Q96S06 567 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 RHNO1Q9BSD3 238 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 TSSK6Q9BXA6 273 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 PLA2G12AQ9BZM1 189 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 DSN1Q9H410 356 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 AMBNQ9NP70 447 aa23.21■■□□□ 1.31
TRADD-201ENST00000345057 HTR3EA5X5Y0 456 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 SLC5A2P31639 672 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 ST13P50502 369 aaKnown RBP23.2■■□□□ 1.3
TRADD-201ENST00000345057 ACSM5Q6NUN0 579 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 HSDL2Q6YN16 418 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 CCDC81Q6ZN84 652 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 CADM2Q8N3J6 435 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 OR2T33Q8NG76 320 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 OR52L1Q8NGH7 329 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 PHOSPHO1Q8TCT1 267 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 BRIX1Q8TDN6 353 aaKnown RBP23.2■■□□□ 1.3
TRADD-201ENST00000345057 ADOQ96SZ5 270 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 LPAR4Q99677 370 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 CRB3Q9BUF7 120 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 GPR83Q9NYM4 423 aa23.2■■□□□ 1.3
TRADD-201ENST00000345057 A0A1W2PQD3 144 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 GTPBP1O00178 669 aaKnown RBP23.19■■□□□ 1.3
TRADD-201ENST00000345057 ZNF264O43296 627 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 TSPAN2O60636 221 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 ENTPD6O75354 484 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 RCBTB2O95199 551 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 HMGN1P05114 100 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 ST3GAL4Q11206 333 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 UBE2UQ5VVX9 321 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 MRPL14Q6P1L8 145 aaKnown RBP23.19■■□□□ 1.3
TRADD-201ENST00000345057 ERI1Q8IV48 349 aaKnown RBP23.19■■□□□ 1.3
TRADD-201ENST00000345057 SLC43A2Q8N370 569 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 TMEM163Q8TC26 289 aa23.19■■□□□ 1.3
TRADD-201ENST00000345057 ATOH1Q92858 354 aaPredicted RBP23.19■■□□□ 1.3
TRADD-201ENST00000345057 VMP1Q96GC9 406 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms