RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OR2T12Q8NG77 320 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 OR5W2Q8NH69 310 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 SLC26A7Q8TE54 656 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 RASSF5Q8WWW0 418 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 TMEM234Q8WY98 164 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 ZBTB8AQ96BR9 441 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 ZG16BQ96DA0 208 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 C1GALT1C1Q96EU7 318 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 PIGQQ9BRB3 760 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 GPATCH1Q9BRR8 931 aaKnown RBP10.76□□□□□ -0.69
SNCA-202ENST00000345009 OR2B2Q9GZK3 357 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 RUBCNLQ9H714 662 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 SPAG4Q9NPE6 437 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 EXOSC3Q9NQT5 275 aaKnown RBP10.76□□□□□ -0.69
SNCA-202ENST00000345009 KLHL28Q9NXS3 571 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 FBXL2Q9UKC9 423 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 CARD8Q9Y2G2 431 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 SHANK1Q9Y566 2161 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 A0A1B0GTH9 108 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 GSTA4O15217 222 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 HOXD4P09016 255 aaPredicted RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 LINGO3P0C6S8 592 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 UBTFL6P0CB48 400 aaPredicted RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 PGCP20142 388 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 RPS4Y1P22090 263 aaKnown RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 CHMP24386 653 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 PCGF2P35227 344 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 SLC7A2P52569 658 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 EEFSECP57772 596 aaKnown RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 COPZ1P61923 177 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 ZNF117Q03924 483 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 VEZF1Q14119 521 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 SELPLGQ14242 412 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 CD226Q15762 336 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 MAPK14Q16539 360 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 VMACQ2NL98 169 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 WLSQ5T9L3 541 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 RAET1LQ5VY80 246 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 ZNF550Q7Z398 422 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 YRDCQ86U90 279 aaKnown RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 ARMC8Q8IUR7 673 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 SLC15A3Q8IY34 581 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 PM20D2Q8IYS1 436 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 ABTB1Q969K4 478 aaPredicted RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 SLC35B4Q969S0 331 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 SFXN2Q96NB2 322 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 RTN4RQ9BZR6 473 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 QRSL1Q9H0R6 528 aaKnown RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 PIF1Q9H611 641 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 EVA1AQ9H8M9 152 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 ARL8BQ9NVJ2 186 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 ADA2Q9NZK5 511 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 KCNE5Q9UJ90 142 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 GPC6Q9Y625 555 aaPredicted RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 HELZ2Q9BYK8 2649 aaKnown RBP10.75□□□□□ -0.69
SNCA-202ENST00000345009 DSPPQ9NZW4 1301 aa10.75□□□□□ -0.69
SNCA-202ENST00000345009 ELOVL7A1L3X0 281 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 CFAP73A6NFT4 308 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 FAM220BPB1ANY3 271 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 B2RBV5 119 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 NPIPA2E9PIF3 369 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 NPIPA3F8WFD2 350 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 GMFGO60234 142 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ZIC3O60481 467 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 SLC19A2O60779 497 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 CELA3AP09093 270 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 FREM3P0C091 2139 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 PABPC4LP0CB38 370 aaKnown RBP10.74□□□□□ -0.69
SNCA-202ENST00000345009 PLA2G2AP14555 144 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ZNF17P17021 662 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ME2P23368 584 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ADH6P28332 368 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 AQP1P29972 269 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 PRKAR1BP31321 381 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 PGM1P36871 562 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 CPA2P48052 419 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 LIPEQ05469 1076 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 MAPK11Q15759 364 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 SPATS1Q496A3 300 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 NHSL2Q5HYW2 709 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 RPS26P11Q5JNZ5 115 aaPredicted RBP10.74□□□□□ -0.69
SNCA-202ENST00000345009 WIPI1Q5MNZ9 446 aaPredicted RBP10.74□□□□□ -0.69
SNCA-202ENST00000345009 MRPL2Q5T653 305 aaKnown RBP10.74□□□□□ -0.69
SNCA-202ENST00000345009 RNF220Q5VTB9 566 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 OLIG3Q7RTU3 272 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 CALHM3Q86XJ0 350 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 PTOV1Q86YD1 416 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 GRAMD2AQ8IUY3 354 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ZZZ3Q8IYH5 903 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 PGAM4Q8N0Y7 254 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 MEIOBQ8N635 442 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ST8SIA1Q92185 356 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ARSGQ96EG1 525 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ZNF583Q96ND8 569 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 TRIM8Q9BZR9 551 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 SLC6A15Q9H2J7 730 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 MED17Q9NVC6 651 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 ICAM5Q9UMF0 924 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 OSGIN2Q9Y236 505 aa10.74□□□□□ -0.69
SNCA-202ENST00000345009 VDAC3Q9Y277 283 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms