RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SCN3BQ9NY72 215 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 GPR52Q9Y2T5 361 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 B3GALT1Q9Y5Z6 326 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 LRRN3E7EW58 273 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 FLRT2O43155 660 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 TSPAN2O60636 221 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 FADS2O95864 444 aaKnown RBP12.46□□□□□ -0.42
CDC42-202ENST00000344548 CH25HO95992 272 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 STSP08842 583 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 FPR3P25089 353 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 ABCD3P28288 659 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 GSTT1P30711 240 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 IFNA8P32881 189 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 RNF4P78317 190 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 MC2RQ01718 297 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 SLC30A6Q6NXT4 461 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 CCDC81Q6ZN84 652 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 RASSF6Q6ZTQ3 369 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 LSMEM1Q8N8F7 131 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 B3GNT7Q8NFL0 401 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 ZNF559Q9BR84 538 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 UBQLN4Q9NRR5 601 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 PLCXD1Q9NUJ7 323 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 NDUFA13Q9P0J0 144 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 CARD8Q9Y2G2 431 aa12.46□□□□□ -0.42
CDC42-202ENST00000344548 OTOGLQ3ZCN5 2332 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 CLCA1A8K7I4 914 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 TLX2O43763 284 aaPredicted RBP12.45□□□□□ -0.42
CDC42-202ENST00000344548 CBFA2T3O75081 653 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 SEC14L2O76054 403 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 LCKP06239 509 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 GP1BAP07359 652 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 IFI30P13284 250 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 NR4A1P22736 598 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 TRA2AQ13595 282 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDC42-202ENST00000344548 ALG10BQ5I7T1 473 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ZNF613Q6PF04 617 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 PAPD4Q6PIY7 484 aaKnown RBP12.45□□□□□ -0.42
CDC42-202ENST00000344548 FAM71CQ8NEG0 241 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 PHOSPHO1Q8TCT1 267 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 MUL1Q969V5 352 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 COPS4Q9BT78 406 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 CRB3Q9BUF7 120 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ZNF426Q9BUY5 554 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ARMC7Q9H6L4 198 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 TMEM27Q9HBJ8 222 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 COPS7AQ9UBW8 275 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ENOPH1Q9UHY7 261 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 PCDHGB2Q9Y5G2 931 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 A0A1W2PNU3 283 aaPredicted RBP12.45□□□□□ -0.42
CDC42-202ENST00000344548 SAGE2PA6NJ88 616 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ADAM10O14672 748 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
CDC42-202ENST00000344548 RGS10O43665 173 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 CPNE3O75131 537 aaKnown RBP12.45□□□□□ -0.42
CDC42-202ENST00000344548 SLC2A10O95528 541 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ACVR2AP27037 513 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 SPEM2Q0P670 501 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 CLPPQ16740 277 aaPredicted RBP12.45□□□□□ -0.42
CDC42-202ENST00000344548 LINC00114Q6XXX2 140 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ZNF620Q6ZNG0 422 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 MARCH3Q86UD3 253 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ISOC1Q96CN7 298 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 OMA1Q96E52 524 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 SH3YL1Q96HL8 342 aaPredicted RBP12.45□□□□□ -0.42
CDC42-202ENST00000344548 SAMD8Q96LT4 415 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ULBP3Q9BZM4 244 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 SEMA4CQ9C0C4 833 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 SLC25A19Q9HC21 320 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 ZBTB20Q9HC78 741 aaPredicted RBP12.45□□□□□ -0.42
CDC42-202ENST00000344548 C14orf105Q9NVL8 296 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 IL20Q9NYY1 176 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 CFL2Q9Y281 166 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 PCDHGB1Q9Y5G3 927 aa12.45□□□□□ -0.42
CDC42-202ENST00000344548 TTC36A6NLP5 189 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 B4DXG7 233 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 MASP2O00187 686 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 TO15178 435 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 CHP2O43745 196 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 GSTM3P21266 225 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 SKP2Q13309 424 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 FAM198BQ6UWH4 519 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 SLC29A4Q7RTT9 530 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 SUMF1Q8NBK3 374 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 OR5M3Q8NGP4 307 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 OR13C2Q8NGS9 318 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 FKBP10Q96AY3 582 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 TSSK6Q9BXA6 273 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 SLC26A1Q9H2B4 701 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 ACOT13Q9NPJ3 140 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 FBXO8Q9NRD0 319 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 SLC39A1Q9NY26 324 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 RSL24D1Q9UHA3 163 aaKnown RBP12.44□□□□□ -0.42
CDC42-202ENST00000344548 SNX5Q9Y5X3 404 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 KNTC1P50748 2209 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 KLF7O75840 302 aaPredicted RBP12.44□□□□□ -0.42
CDC42-202ENST00000344548 UMODP07911 640 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 CELA2AP08217 269 aa12.44□□□□□ -0.42
CDC42-202ENST00000344548 TBXA2RP21731 343 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms