RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 SIRT5Q9NXA8 310 aa10.21□□□□□ -0.77
RPL28-201ENST00000344063 MYEF2Q9P2K5 600 aaKnown RBP10.21□□□□□ -0.77
RPL28-201ENST00000344063 SLC23A1Q9UHI7 598 aa10.21□□□□□ -0.77
RPL28-201ENST00000344063 TMEM14AQ9Y6G1 99 aa10.21□□□□□ -0.77
RPL28-201ENST00000344063 SGCEO43556 437 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 CERS1P27544 350 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 AQP2P41181 271 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 ASAH1Q13510 395 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 PGGHGQ32M88 737 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 PLK5Q496M5 336 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 ACSM3Q53FZ2 586 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 METTL11BQ5VVY1 283 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 FIGNL1Q6PIW4 674 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 CDRT4Q8N9R6 151 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 OR2M2Q96R28 347 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 CST11Q9H112 138 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 MED20Q9H944 212 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 A4GALTQ9NPC4 353 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 DIMT1Q9UNQ2 313 aaKnown RBP10.21□□□□□ -0.78
RPL28-201ENST00000344063 TXNL1O43396 289 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 TCRBP04435 133 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 UCHL1P09936 223 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 GABRA5P31644 462 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 PSMB10P40306 273 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 TPMTP51580 245 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 CLDN12P56749 244 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 GALK2Q01415 458 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 PRDX1Q06830 199 aaKnown RBP10.21□□□□□ -0.78
RPL28-201ENST00000344063 OR4N5Q8IXE1 308 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 ZNF454Q8N9F8 522 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 OR9A2Q8NGT5 310 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 OR4K13Q8NH42 304 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 PNO1Q9NRX1 252 aaKnown RBP10.21□□□□□ -0.78
RPL28-201ENST00000344063 KLHL9Q9P2J3 617 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 FBXL2Q9UKC9 423 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 SLC7A7Q9UM01 511 aa10.21□□□□□ -0.78
RPL28-201ENST00000344063 DOCK5Q9H7D0 1870 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 PCMT1P22061 227 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 PRPH2P23942 346 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 ELAVL4P26378 380 aaKnown RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 MMP12P39900 470 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 KCNJ5P48544 419 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 RAB5BP61020 215 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 SNRPGP62308 76 aaKnown RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 KCNJ10P78508 379 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 PIP5KL1Q5T9C9 394 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 RTL10Q7L3V2 364 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 OR2L3Q8NG85 312 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 OR4M1Q8NGD0 313 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 ZMYND19Q96E35 227 aaPredicted RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 PITX2Q99697 317 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 SLC6A7Q99884 636 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 ZNF416Q9BWM5 594 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 QRSL1Q9H0R6 528 aaKnown RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 SCP2D1Q9UJQ7 156 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 NPPBP16860 134 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 BMPR1AP36894 532 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 XCR1P46094 333 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 VEGFCP49767 419 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 CDK3Q00526 305 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 SLC14A1Q13336 389 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 GPR176Q14439 515 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 P2RY14Q15391 338 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 PCGF3Q3KNV8 242 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 ALG10BQ5I7T1 473 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 LRRC28Q86X40 367 aaPredicted RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 RBM45Q8IUH3 476 aaKnown RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 SIAH3Q8IW03 269 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 ZNF683Q8IZ20 524 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 ZNF740Q8NDX6 193 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 OR52E2Q8NGJ4 325 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 OR6N2Q8NGY6 317 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 TMEM239Q8WW34 195 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 GAL3ST3Q96A11 431 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 C1QTNF2Q9BXJ5 285 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 WASH6PQ9NQA3 447 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 MED17Q9NVC6 651 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 ACTR10Q9NZ32 417 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 OR5K4A6NMS3 321 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 B4DGG1 531 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 LGALS8O00214 317 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 KIAA0355O15063 1070 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 FZD7O75084 574 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 SYPP08247 313 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 TRAPPC2P0DI81 140 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 TRAPPC2BP0DI82 140 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 PIPP12273 146 aaPredicted RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 ARF3P61204 181 aaPredicted RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 ARF1P84077 181 aaKnown RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 RUNX3Q13761 415 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 TOMM20Q15388 145 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 CST9Q5W186 159 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 FAHD1Q6P587 224 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 APOOLQ6UXV4 268 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 CALHM3Q86XJ0 350 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 PLPP6Q8IY26 295 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 OR52I1Q8NGK6 324 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 ZNF296Q8WUU4 475 aaPredicted RBP10.2□□□□□ -0.78
RPL28-201ENST00000344063 BTBD2Q9BX70 525 aa10.2□□□□□ -0.78
RPL28-201ENST00000344063 MS4A8Q9BY19 250 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms