RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ILF3Q12906 894 aaKnown RBP eCLIP7.6□□□□□ -1.19
ATG4A-201ENST00000343524 ARHGEF7Q14155 803 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 KCNAB1Q14722 419 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM255AQ5JRV8 349 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 MANEAQ5SRI9 462 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 DNLZQ5SXM8 178 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 MRGPREQ86SM8 312 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 MISPQ8IVT2 679 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 DCUN1D3Q8IWE4 304 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 ZBTB2Q8N680 514 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 ZFP41Q8N8Y5 198 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 PHOSPHO1Q8TCT1 267 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 THEM6Q8WUY1 208 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 FGF11Q92914 225 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 COL26A1Q96A83 441 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 TIFAQ96CG3 184 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 PCED1BQ96HM7 432 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 ZFP3Q96NJ6 502 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 MS4A4EQ96PG1 132 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 SLC35A5Q9BS91 424 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 MRI1Q9BV20 369 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 OR10A4Q9H209 315 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 HRASLSQ9HDD0 168 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 INPP5EQ9NRR6 644 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 KLHL42Q9P2K6 505 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 VPS29Q9UBQ0 182 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 GHRLQ9UBU3 117 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 FKBPLQ9UIM3 349 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 RCE1Q9Y256 329 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 EXOGQ9Y2C4 368 aaKnown RBP7.6□□□□□ -1.19
ATG4A-201ENST00000343524 CBY1Q9Y3M2 126 aa7.6□□□□□ -1.19
ATG4A-201ENST00000343524 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 SMIM28A0A1B0GU29 152 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 C2orf92A0A1B0GVN3 265 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 MGAT4DA6NG13 374 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 C19orf81C9J6K1 198 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 GPR182O15218 404 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 SLC31A2O15432 143 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 BCL2L11O43521 198 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 PRAMEF11O60813 436 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 PIRTP0C851 137 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF865P0CJ78 1059 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 HPGDP15428 266 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 MST1P26927 711 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 HOXA6P31267 233 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 VIPR1P32241 457 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 GPX4P36969 197 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 GDF5P43026 501 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 UBE2IP63279 158 aaKnown RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 DUSP4Q13115 394 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 HABP2Q14520 560 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 LIPJQ5W064 366 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 CXorf57Q6NSI4 855 aaKnown RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 REEP3Q6NUK4 255 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF322Q6U7Q0 402 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 IL34Q6ZMJ4 242 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 GAREM2Q75VX8 874 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 PIANPQ8IYJ0 282 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 GJD3Q8N144 294 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 SLC43A2Q8N370 569 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 OR5J2Q8NH18 312 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 OR51Q1Q8NH59 317 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 SPRYD4Q8WW59 207 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 EDARADDQ8WWZ3 215 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 BADQ92934 168 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 CNTNAP3BQ96NU0 1288 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 C19orf43Q9BQ61 176 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 MGME1Q9BQP7 344 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 EBPLQ9BY08 206 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 TEX101Q9BY14 249 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 EGLN1Q9GZT9 426 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 BRF2Q9HAW0 419 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 BEX1Q9HBH7 125 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 CTPS2Q9NRF8 586 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 ACSS1Q9NUB1 689 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-201ENST00000343524 GREB1Q4ZG55 1949 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 PATJQ8NI35 1801 aa7.59□□□□□ -1.19
ATG4A-201ENST00000343524 IGLV3-10A0A075B6K4 115 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 A0A1W2PRQ8 180 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 MEX3AA1L020 520 aaKnown RBP7.58□□□□□ -1.2
ATG4A-201ENST00000343524 C2orf78A6NCI8 922 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 E9PI62 339 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 GFYI3L273 518 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 TERTO14746 1132 aaKnown RBP7.58□□□□□ -1.2
ATG4A-201ENST00000343524 SIAH2O43255 324 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 EIF4E2O60573 245 aaKnown RBP7.58□□□□□ -1.2
ATG4A-201ENST00000343524 SEMA7AO75326 666 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 UBXN7O94888 489 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 NDUFB6O95139 128 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 MOCS2O96007 188 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-201ENST00000343524 IFNGP01579 166 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 ATP1B1P05026 303 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 INSRRP14616 1297 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF16P17020 682 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-201ENST00000343524 RAB4AP20338 218 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 ABCD3P28288 659 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 CSF2RBP32927 897 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 SOX18P35713 384 aa7.58□□□□□ -1.2
ATG4A-201ENST00000343524 RAD52P43351 418 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms