RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 FUT1P19526 365 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 NR4A1P22736 598 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 DCAF7P61962 342 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 CLPPQ16740 277 aaPredicted RBP18.4■□□□□ 0.54
RTN1-202ENST00000342503 ZNF528Q3MIS6 628 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 PRR22Q8IZ63 422 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 CADM2Q8N3J6 435 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 CLDN22Q8N7P3 220 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 HS6ST2Q96MM7 605 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 NRSN2Q9GZP1 204 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 GPN2Q9H9Y4 310 aaPredicted RBP18.4■□□□□ 0.54
RTN1-202ENST00000342503 APMAPQ9HDC9 416 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 MED31Q9Y3C7 131 aa18.4■□□□□ 0.54
RTN1-202ENST00000342503 RPL36Q9Y3U8 105 aaKnown RBP18.4■□□□□ 0.54
RTN1-202ENST00000342503 UTS2O95399 124 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 DBTP11182 482 aaKnown RBP18.39■□□□□ 0.53
RTN1-202ENST00000342503 ZNF91Q05481 1191 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 SYT14P1Q58G82 188 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 MEDAGQ5VYS4 303 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 HLA-DQA1Q5Y7H0 255 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 PLAG1Q6DJT9 500 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 SLC30A6Q6NXT4 461 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 PPP1R3BQ86XI6 285 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 GATSQ8NAP1 163 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 TMEM163Q8TC26 289 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 LRR1Q96L50 414 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 SAMD8Q96LT4 415 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 ZNF582Q96NG8 517 aaPredicted RBP18.39■□□□□ 0.53
RTN1-202ENST00000342503 SLC38A2Q96QD8 506 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 UBQLN4Q9NRR5 601 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 TAS2R16Q9NYV7 291 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 COPS7AQ9UBW8 275 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.39■□□□□ 0.53
RTN1-202ENST00000342503 SLC35A3Q9Y2D2 325 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 ZDBF2Q9HCK1 2354 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 MYO15AQ9UKN7 3530 aa18.39■□□□□ 0.53
RTN1-202ENST00000342503 EFCAB7A8K855 629 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 NTN3O00634 580 aaPredicted RBP18.38■□□□□ 0.53
RTN1-202ENST00000342503 PTHP01270 115 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 ADORA3P0DMS8 318 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 MLLT10P55197 1068 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 DCDP81605 110 aaKnown RBP18.38■□□□□ 0.53
RTN1-202ENST00000342503 NFATC3Q12968 1075 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 PGGHGQ32M88 737 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 ALG10BQ5I7T1 473 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 FNDC7Q5VTL7 733 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 KIRREL2Q6UWL6 708 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 CDK20Q8IZL9 346 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 CACTIN-AS1Q8N1I8 211 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 ZNF527Q8NB42 609 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 WDR36Q8NI36 951 aaKnown RBP18.38■□□□□ 0.53
RTN1-202ENST00000342503 C9orf43Q8TAL5 461 aaPredicted RBP18.38■□□□□ 0.53
RTN1-202ENST00000342503 BPIFA2Q96DR5 249 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 CRELD1Q96HD1 420 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 CDCA4Q9BXL8 241 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 WWTR1Q9GZV5 400 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 MEPEQ9NQ76 525 aaPredicted RBP18.38■□□□□ 0.53
RTN1-202ENST00000342503 RPS6KB2Q9UBS0 482 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 MRTO4Q9UKD2 239 aaKnown RBP18.38■□□□□ 0.53
RTN1-202ENST00000342503 TMEM5Q9Y2B1 443 aa18.38■□□□□ 0.53
RTN1-202ENST00000342503 IGHV3-20A0A0C4DH32 117 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 CDC14CA4D256 554 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 SYNDIG1LA6NDD5 238 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 D6RAR5 112 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 M0R082 166 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 SCDO00767 359 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 CH25HO95992 272 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 HEXBP07686 556 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 HBQ1P09105 142 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 NR0B1P51843 470 aaKnown RBP18.37■□□□□ 0.53
RTN1-202ENST00000342503 CTBP2P56545 445 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 AQP6Q13520 282 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 CD226Q15762 336 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 ZNF385CQ66K41 422 aaPredicted RBP18.37■□□□□ 0.53
RTN1-202ENST00000342503 TCEAL6Q6IPX3 200 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 LINC00114Q6XXX2 140 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 TMPRSS11FQ6ZWK6 438 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 AMER2Q8N7J2 671 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 BRIX1Q8TDN6 353 aaKnown RBP18.37■□□□□ 0.53
RTN1-202ENST00000342503 TCEAL3Q969E4 200 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 ADOQ96SZ5 270 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 CTRCQ99895 268 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 PRRG3Q9BZD7 231 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 ARRDC1-AS1Q9H2J1 176 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 IL20RAQ9UHF4 553 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 GPR52Q9Y2T5 361 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 HEATR5AQ86XA9 2040 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 ASCC3Q8N3C0 2202 aaKnown RBP18.37■□□□□ 0.53
RTN1-202ENST00000342503 OR6C76A6NM76 312 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 SURF4O15260 269 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 REM1O75628 298 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 RFPL3O75679 317 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 HPGDP15428 266 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 TGFBR2P37173 567 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 ADH7P40394 386 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 RBM34P42696 430 aaKnown RBP18.37■□□□□ 0.53
RTN1-202ENST00000342503 ROR2Q01974 943 aaKnown RBP18.37■□□□□ 0.53
RTN1-202ENST00000342503 NCF4Q15080 339 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 CTF1Q16619 201 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 TIGD6Q17RP2 521 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms