RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SLC6A20Q9NP91 592 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 UBE2QL1A1L167 161 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 SH3D21A4FU49 640 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 PRAMEF10O60809 474 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 MAPK3P27361 379 aaPredicted RBP11.92□□□□□ -0.5
LIN54-201ENST00000340417 PCGF2P35227 344 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 SNU13P55769 128 aaKnown RBP11.92□□□□□ -0.5
LIN54-201ENST00000340417 CAMK2DQ13557 499 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 SYPL1Q16563 259 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 ISXQ2M1V0 245 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 CWF19L1Q69YN2 538 aaKnown RBP11.92□□□□□ -0.5
LIN54-201ENST00000340417 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 CA5BP1Q8WTZ4 195 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 C19orf43Q9BQ61 176 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 PIGUQ9H490 435 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 GLIPR2Q9H4G4 154 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 SCN1AP35498 2009 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 TMED7-TICAM2A0A0A6YYA0 188 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 IGHV4-34P06331 123 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 THBS2P35442 1172 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 POU3F4P49335 361 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 NUDT6P53370 316 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 PTRH1Q86Y79 214 aaKnown RBP11.92□□□□□ -0.5
LIN54-201ENST00000340417 PM20D2Q8IYS1 436 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 CHCHD6Q9BRQ6 235 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 TMED7Q9Y3B3 224 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 TRABD2BA6NFA1 517 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 GLSO94925 669 aaPredicted RBP11.91□□□□□ -0.5
LIN54-201ENST00000340417 HRGP04196 525 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 MXD1Q05195 221 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 BCL2L15Q5TBC7 163 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 WDR74Q6RFH5 385 aaPredicted RBP11.91□□□□□ -0.5
LIN54-201ENST00000340417 SHFQ7M4L6 423 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 OR2A1Q8NGT9 310 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 CPT1CQ8TCG5 803 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 THRSPQ92748 146 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 TESCQ96BS2 214 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 HMG20AQ9NP66 347 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 OBP2BQ9NPH6 170 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 OLAHQ9NV23 265 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 PDLIM1O00151 329 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 PHYHO14832 338 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 MTRF1O75570 445 aaKnown RBP11.91□□□□□ -0.5
LIN54-201ENST00000340417 AGFG2O95081 481 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 C8BP07358 591 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 FURINP09958 794 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 OR1Q1Q15612 314 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 C5orf46Q6UWT4 87 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 OR4K5Q8NGD3 323 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 APH1AQ96BI3 265 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 SDR39U1Q9NRG7 319 aaPredicted RBP11.91□□□□□ -0.5
LIN54-201ENST00000340417 PMS2P1A4D2B8 440 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 I6L893 689 aaPredicted RBP11.91□□□□□ -0.5
LIN54-201ENST00000340417 CKMT1AP12532 417 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 TRHRP34981 398 aaPredicted RBP11.91□□□□□ -0.5
LIN54-201ENST00000340417 PIN1Q13526 163 aaPredicted RBP11.91□□□□□ -0.5
LIN54-201ENST00000340417 CEACAM7Q14002 265 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 MAPK11Q15759 364 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 COQ5Q5HYK3 327 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 PERM1Q5SV97 790 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 PWWP2BQ6NUJ5 590 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 WDR20Q8TBZ3 569 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 DECR2Q9NUI1 292 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 KLHL9Q9P2J3 617 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 TEX13CA0A0J9YWL9 993 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 WRBO00258 174 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 ETS2P15036 469 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 TPTEP56180 551 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 GPR107Q5VW38 600 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 KRT74Q7RTS7 529 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 IGFN1Q86VF2 1251 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 ZNF683Q8IZ20 524 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 SGPP1Q9BX95 441 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 DIABLOQ9NR28 239 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 IL20RAQ9UHF4 553 aa11.91□□□□□ -0.5
LIN54-201ENST00000340417 DVL2O14641 736 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 FASLGP48023 281 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 PRKXP51817 358 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 TAS2R43P59537 309 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 POU4F2Q12837 409 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 PDE7AQ13946 482 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 MEDAGQ5VYS4 303 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 VTCN1Q7Z7D3 282 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 DND1Q8IYX4 353 aaKnown RBP11.9□□□□□ -0.5
LIN54-201ENST00000340417 OR8K3Q8NH51 312 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 OR2A14Q96R47 310 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 CNN2Q99439 309 aaKnown RBP11.9□□□□□ -0.5
LIN54-201ENST00000340417 DHDHQ9UQ10 334 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 FGF17O60258 216 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 SNNO75324 88 aaPredicted RBP11.9□□□□□ -0.5
LIN54-201ENST00000340417 ARNTP27540 789 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 SDC2P34741 201 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 EFNA3P52797 238 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 MPP2Q14168 576 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 TCTN3Q6NUS6 607 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 WFDC8Q8IUA0 241 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.9□□□□□ -0.5
LIN54-201ENST00000340417 TESQ9UGI8 421 aaKnown RBP11.9□□□□□ -0.5
LIN54-201ENST00000340417 ENPP4Q9Y6X5 453 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms