RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SLC30A3Q99726 388 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ATP5SQ99766 215 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM70Q9BUB7 260 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ELL3Q9HB65 397 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PARPBPQ9NWS1 579 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 M0R143 59 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 BCAS1O75363 584 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 WNT11O96014 354 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PRKACGP22612 351 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SLC6A11P48066 632 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 JAG1P78504 1218 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PNRC1Q12796 327 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RNF151Q2KHN1 245 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 NOXRED1Q6NXP6 359 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 FAM180BQ6P0A1 224 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CATSPERDQ86XM0 798 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 BBS1Q8NFJ9 593 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CYB5D2Q8WUJ1 264 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 OR1E3Q8WZA6 343 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF382Q96SR6 550 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TREX2Q9BQ50 279 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SLC6A17Q9H1V8 727 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF275Q9NSD4 429 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ACSS1Q9NUB1 689 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CLIC1O00299 241 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 YY2O15391 372 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ADAM11O75078 769 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 POP7O75817 140 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 JCHAINP01591 159 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SERPINA7P05543 415 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 OR4E1P0C645 316 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 BCKDHAP12694 445 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CYBAP13498 195 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MYLK3Q32MK0 819 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SGO1Q5FBB7 561 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TPRG1LQ5T0D9 272 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 C6orf15Q6UXA7 325 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RNF44Q7L0R7 432 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 OR7G1Q8NGA0 311 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 FBXO30Q8TB52 745 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RNF141Q8WVD5 230 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ASB5Q8WWX0 329 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 FBXL20Q96IG2 436 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SUSD3Q96L08 255 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 C1orf74Q96LT6 269 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TRIB1Q96RU8 372 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ADAM33Q9BZ11 813 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MED9Q9NWA0 146 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 AGO1Q9UL18 857 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TCAF1Q9Y4C2 921 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PLEKHM1Q9Y4G2 1056 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 LRRC30A6NM36 301 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 HCKP08631 526 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ENDOGQ14249 297 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 C9orf64Q5T6V5 341 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 BCL2L15Q5TBC7 163 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 HBMQ6B0K9 141 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 DHRS4L2Q6PKH6 230 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 KCTD8Q6ZWB6 473 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TMED4Q7Z7H5 227 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 OR4N5Q8IXE1 308 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 NLGN4XQ8N0W4 816 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZBTB2Q8N680 514 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 NLGN4YQ8NFZ3 816 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 FCRL5Q96RD9 977 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CCSER2Q9H7U1 834 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 POLD4Q9HCU8 107 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PLEKHJ1Q9NW61 149 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 KIR2DS1A0A191URI9 304 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RCCD1A6NED2 376 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ANKRD61A6NGH8 418 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 GPR171O14626 319 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MATN3O15232 486 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 LIASO43766 372 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ANGPTL7O43827 346 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RASAL1O95294 804 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 STSP08842 583 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF43P17038 809 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MGAT1P26572 445 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 KIR2DS4P43632 304 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 HSPA7P48741 367 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 KIR2DS1Q14954 304 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CNN3Q15417 329 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 DUSP6Q16828 381 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM119Q4V9L6 283 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RNASE10Q5GAN6 216 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 DCST2Q5T1A1 773 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SPNS3Q6ZMD2 512 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 NAXEQ8NCW5 288 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 OR1J2Q8NGS2 313 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TANKQ92844 425 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PMEPA1Q969W9 287 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 FAM136AQ96C01 138 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF707Q96C28 371 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM80Q96HE8 168 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 C10orf90Q96M02 699 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SEPHS2Q99611 448 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TNKS2Q9H2K2 1166 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ESRP2Q9H6T0 727 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms