RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 FLRT2O43155 660 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CYB5BO43169 146 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TCF21O43680 179 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GALR3O60755 368 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TOX4O94842 621 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CST2P09228 141 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PRKACGP22612 351 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CD1BP29016 333 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 MMP15P51511 669 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 JOSD1Q15040 202 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 DUOXA1Q1HG43 343 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ARSJQ5FYB0 599 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM201Q5SNT2 666 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 FDX2Q6P4F2 183 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GOLGA7Q7Z5G4 137 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM135Q86UB9 458 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CCDC74BQ96LY2 380 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ATF6BQ99941 703 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 UTP23Q9BRU9 249 aaKnown RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 SF3B5Q9BWJ5 86 aaKnown RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 FAIM2Q9BWQ8 316 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 NIF3L1Q9GZT8 377 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TAS2R13Q9NYV9 303 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GSKIPQ9P0R6 139 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PTGFRNQ9P2B2 879 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF282Q9UDV7 671 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 AKT3Q9Y243 479 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GPR45Q9Y5Y3 372 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CCDC187A0A096LP49 1063 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CDC14BO60729 498 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 SLC25A27O95847 323 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 SFTA3P0C7M3 94 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PTNP21246 168 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 DLSTP36957 453 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 SNCAP37840 140 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GDNFP39905 211 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 NPBWR1P48145 328 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 DHPSP49366 369 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CAV2P51636 162 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GEMP55040 296 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TAS2R38P59533 333 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ACTBP60709 375 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ACTG1P63261 375 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CYCSP99999 105 aaKnown RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 MXD1Q05195 221 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 IL10RBQ08334 325 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF616Q08AN1 781 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GBX1Q14549 363 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 SPDYE7PQ495Y7 208 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PYCR3Q53H96 274 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 RAB6CQ53S08 254 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 KIAA0930Q6ICG6 404 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 OVOS1Q6IE37 1185 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 LANCL3Q6ZV70 420 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 LINGO2Q7L985 606 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GRINAQ7Z429 371 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 NRSN1Q8IZ57 195 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 LRRC52Q8N7C0 313 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 RNASEH2CQ8TDP1 164 aaKnown RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ZBTB8AQ96BR9 441 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 FAM193BQ96PV7 902 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 RAB6CQ9H0N0 254 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 HHATLQ9HCP6 504 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 HSPB7Q9UBY9 170 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PCDHB11Q9Y5F2 797 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TRBV11-1A0A0K0K1C0 115 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CDC40O60508 579 aaKnown RBP eCLIP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ARL6IP5O75915 188 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TOXO94900 526 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 SIX3O95343 332 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PET100P0DJ07 73 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GSTM3P21266 225 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 DGKAP23743 735 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 MIPP30301 263 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CRYBB2P43320 205 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 RBX1P62877 108 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 MC1RQ01726 317 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 NHLH1Q02575 133 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GAMTQ14353 236 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 HEPACAMQ14CZ8 416 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 VWA2Q5GFL6 755 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PYY3Q5JQD4 70 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF678Q5SXM1 525 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PRAMEF20Q5VT98 475 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 C1orf189Q5VU69 101 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GPR153Q6NV75 609 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 LYPD4Q6UWN0 246 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TMPRSS7Q7RTY8 843 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ADGRA1Q86SQ6 560 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 NUDT13Q86X67 352 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PTGR2Q8N8N7 351 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 EXD3Q8N9H8 876 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PLPP5Q8NEB5 264 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 OR9I1Q8NGQ6 314 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 HMGCLL1Q8TB92 370 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 NUDCD2Q8WVJ2 157 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM176AQ96HP8 235 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 FOXN4Q96NZ1 517 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 BHLHE41Q9C0J9 482 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 OR8D2Q9GZM6 311 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms