RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 BAMBIQ13145 260 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 COL9A2Q14055 689 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-201ENST00000338910 SLC9A5Q14940 896 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 TMEM35AQ53FP2 167 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 OTUB1Q96FW1 271 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-201ENST00000338910 ZNF649Q9BS31 505 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 KIR3DX1Q9H7L2 352 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 NEUROD4Q9HD90 331 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 SEC14L3Q9UDX4 400 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 FKBP7Q9Y680 259 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 M0R3H8 397 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 PGRMC2O15173 223 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 ERAL1O75616 437 aaKnown RBP17.46■□□□□ 0.38
PSPC1-201ENST00000338910 HNRNPA2B1P22626 353 aaKnown RBP17.46■□□□□ 0.38
PSPC1-201ENST00000338910 FRKP42685 505 aaPredicted RBP17.46■□□□□ 0.38
PSPC1-201ENST00000338910 RFX3P48380 749 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 IDNKQ5T6J7 187 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 ACOT4Q8N9L9 421 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 TOE1Q96GM8 510 aaKnown RBP17.46■□□□□ 0.38
PSPC1-201ENST00000338910 SAP130Q9H0E3 1048 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 DPAGT1Q9H3H5 408 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 GLIPR2Q9H4G4 154 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 PRDM7Q9NQW5 492 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 ATG4BQ9Y4P1 393 aa17.46■□□□□ 0.38
PSPC1-201ENST00000338910 LRRC72A6NJI9 287 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 HMGN4O00479 90 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 HRO43593 1189 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 CFDP00746 253 aaPredicted RBP17.45■□□□□ 0.38
PSPC1-201ENST00000338910 ALPPL2P10696 532 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 PUDPQ08623 228 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 ZNF750Q32MQ0 723 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 SLC27A4Q6P1M0 643 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 ABHD17CQ6PCB6 329 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 LINC00471Q8N535 108 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 FNDC11Q9BVV2 318 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 NUBP2Q9Y5Y2 271 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 TEX13CA0A0J9YWL9 993 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 A0A1W2PR48 441 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 EIF4EP06730 217 aaKnown RBP17.45■□□□□ 0.38
PSPC1-201ENST00000338910 HOXC4P09017 264 aaPredicted RBP17.45■□□□□ 0.38
PSPC1-201ENST00000338910 HIST1H1TP22492 207 aaPredicted RBP17.45■□□□□ 0.38
PSPC1-201ENST00000338910 RBMS1P29558 406 aaKnown RBP17.45■□□□□ 0.38
PSPC1-201ENST00000338910 SRP54P61011 504 aaKnown RBP17.45■□□□□ 0.38
PSPC1-201ENST00000338910 RTL4Q6ZR62 310 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 OAFQ86UD1 273 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 DTX3Q8N9I9 347 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 OR4F15Q8NGB8 312 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 OR8D4Q8NGM9 314 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 ZNF607Q96SK3 696 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 PPA2Q9H2U2 334 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 SRMSQ9H3Y6 488 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 SLC35C2Q9NQQ7 365 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 OR6C2Q9NZP2 312 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 KCMF1Q9P0J7 381 aa17.45■□□□□ 0.38
PSPC1-201ENST00000338910 RABL2AQ9UBK7 228 aaPredicted RBP17.45■□□□□ 0.38
PSPC1-201ENST00000338910 A0A1B0GVI7 797 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 EEF1E1O43324 174 aaKnown RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 CHST10O43529 356 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 TCRBP04435 133 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 SYPP08247 313 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 DRD2P14416 443 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 GLULP15104 373 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 GALP22466 123 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 ATP5A1P25705 553 aaKnown RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 PITPNBP48739 271 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 NCBP2P52298 156 aaKnown RBP eCLIP17.44■□□□□ 0.385e-6■□□□□ 8.3
PSPC1-201ENST00000338910 TRA2BP62995 288 aaKnown RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 SMAD4Q13485 552 aaKnown RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 ZNF791Q3KP31 576 aaPredicted RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 HBMQ6B0K9 141 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 DGLUCYQ7Z3D6 616 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 GPR135Q8IZ08 494 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 TBC1D19Q8N5T2 526 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 FRMD1Q8N878 549 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 CEP76Q8TAP6 659 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 RBPMSQ93062 196 aaKnown RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 AMDHD1Q96NU7 426 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 TREX2Q9BQ50 279 aaPredicted RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 FAIM2Q9BWQ8 316 aa17.44■□□□□ 0.38
PSPC1-201ENST00000338910 PHF7Q9BWX1 381 aaPredicted RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 ACSS1Q9NUB1 689 aaPredicted RBP17.44■□□□□ 0.38
PSPC1-201ENST00000338910 MEIKINA0A087WXM9 373 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 LOC105369274A0A096LPK9 316 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 MAN2B1O00754 1011 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 TSPAN4O14817 238 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 UBXN7O94888 489 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 C8orf89P0DMQ9 161 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 GSTM3P21266 225 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 IL32P24001 234 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 CERS1P27544 350 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 AHRP35869 848 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 SRP9P49458 86 aaKnown RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 PRKAG1P54619 331 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 CDH11P55287 796 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 FZD5Q13467 585 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 SLC36A2Q495M3 483 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 C18orf63Q68DL7 685 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 KRT74Q7RTS7 529 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 OR4N4Q8N0Y3 316 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 KLHL36Q8N4N3 616 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms