RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CDH23Q9H251 3354 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 PEX12O00623 359 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 PSMA3P25788 255 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 AK4P27144 223 aaPredicted RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 TLX1P31314 330 aaPredicted RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 MPP7Q5T2T1 576 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 VITQ6UXI7 678 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 DPPA4Q7L190 304 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 GET4Q7L5D6 327 aaPredicted RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 CAMKMTQ7Z624 323 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 TCTE3Q8IZS6 198 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 HDDC3Q8N4P3 179 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 GALNT6Q8NCL4 622 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 OR11H4Q8NGC9 324 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 OR56A1Q8NGH5 318 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 LGALS14Q8TCE9 139 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 THAP4Q8WY91 577 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF514Q96K75 400 aaPredicted RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 HSPA12BQ96MM6 686 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 IGFLR1Q9H665 355 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 SRA1Q9HD15 236 aaKnown RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 C20orf141Q9NUB4 165 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 COPS3Q9UNS2 423 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 MED31Q9Y3C7 131 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 OR10H1Q9Y4A9 318 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 MAP1BP46821 2468 aaKnown RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 LATS1O95835 1130 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 ANXA7P20073 488 aaKnown RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 HIST1H1TP22492 207 aaPredicted RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 GDNFP39905 211 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 GBX2P52951 348 aaPredicted RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 PDE7AQ13946 482 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 APOOLQ6UXV4 268 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 C12orf40Q86WS4 652 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 CPXM2Q8N436 756 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 SETD7Q8WTS6 366 aaKnown RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 CREB3L1Q96BA8 519 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 RNF170Q96K19 258 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 INSM2Q96T92 566 aaPredicted RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 PDCD10Q9BUL8 212 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 PPP1R3EQ9H7J1 279 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 TANC1Q9C0D5 1861 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 A0A0G2JPF8 293 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 HNRNPCL3B7ZW38 293 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 NARSO43776 548 aaKnown RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 GREM1O60565 184 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 HNRNPCL4P0DMR1 293 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF3P17036 446 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 GPNMBQ14956 572 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 ZBTB37Q5TC79 503 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 TEX261Q6UWH6 196 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 CFAP77Q6ZQR2 320 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 DNAAF1Q8NEP3 725 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 OR5J2Q8NH18 312 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 METTL2AQ96IZ6 378 aaKnown RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 TNFRSF13CQ96RJ3 184 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 RSPO3Q9BXY4 272 aaPredicted RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 KLK11Q9UBX7 282 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 U3KQ87 197 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 TRPM6Q9BX84 2022 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 PRRT4C9JH25 899 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 TRAPPC2P0DI81 140 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 TRAPPC2BP0DI82 140 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 AHCYP23526 432 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 DDX6P26196 483 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 BCL6P41182 706 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 SQSTM1Q13501 440 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 IRF5Q13568 498 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 YOD1Q5VVQ6 348 aaPredicted RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 GARNL3Q5VVW2 1013 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 HBMQ6B0K9 141 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 OR5M3Q8NGP4 307 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 OR2L2Q8NH16 312 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 TCF7L1Q9HCS4 588 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 SPHK1Q9NYA1 384 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 CA5BQ9Y2D0 317 aa13.17□□□□□ -0.3
PCDH8-201ENST00000338862 TP53BP1Q12888 1972 aaPredicted RBP13.17□□□□□ -0.3
PCDH8-201ENST00000338862 C1QTNF3-AMACRE9PGA6 284 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 OMPP47874 163 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 LIMS1P48059 325 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 PER3P56645 1201 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 CSNK1G2P78368 415 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 SLC7A9P82251 487 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 CDK5Q00535 292 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 HSD17B12Q53GQ0 312 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 ELP2Q6IA86 826 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 PYHIN1Q6K0P9 492 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 LCTLQ6UWM7 567 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 RNF165Q6ZSG1 346 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 CHFRQ96EP1 664 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 MAN2C1Q9NTJ4 1040 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 SIDT1Q9NXL6 827 aaKnown RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 PFDN2Q9UHV9 154 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TRABD2BA6NFA1 517 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms