RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CAMK2BQ13554 666 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RFX4Q33E94 735 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CBLN3Q6UW01 205 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF440Q8IYI8 595 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TMCO5AQ8N6Q1 288 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 OR4K5Q8NGD3 323 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RNF217Q8TC41 542 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ADAMTS17Q8TE56 1095 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GRHL3Q8TE85 626 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GTPBP3Q969Y2 492 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TMCO6Q96DC7 493 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TRIM2Q9C040 744 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ANKRD19PQ9H560 264 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 A0A087WUU8 490 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 C17orf51A8MQB3 221 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 DXOO77932 396 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SLC34A2O95436 690 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CLIC3O95833 236 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ANGPTL1O95841 491 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GNAO1P09471 354 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 POLR2IP36954 125 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CCR4P51679 360 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 NUP54Q7Z3B4 507 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RPS19BP1Q86WX3 136 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CADM2Q8N3J6 435 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SLC15A4Q8N697 577 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 KIAA1143Q96AT1 154 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SH3YL1Q96HL8 342 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PRSS27Q9BQR3 290 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RIBC2Q9H4K1 309 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF556Q9HAH1 456 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 FAM118AQ9NWS6 357 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 YARS2Q9Y2Z4 477 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PCNX3Q9H6A9 2034 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 A0A1B0GWA3 101 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 HCRTR2O43614 444 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GMFGO60234 142 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LYPD3O95274 346 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 FBXO45P0C2W1 286 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LINGO3P0C6S8 592 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LIPCP11150 499 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PTNP21246 168 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SOX3P41225 446 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF117Q03924 483 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PGBD2Q6P3X8 592 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF613Q6PF04 617 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF730Q6ZMV8 503 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 APLFQ8IW19 511 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CHERPQ8IWX8 916 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MARVELD2Q8N4S9 558 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LSMEM1Q8N8F7 131 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF555Q8NEP9 628 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TMEM255BQ8WV15 326 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ACOT11Q8WXI4 607 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LAT2Q9GZY6 243 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 EXOSC3Q9NQT5 275 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PAPOLBQ9NRJ5 636 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 UBAP1Q9NZ09 502 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MGAT4BQ9UQ53 548 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PCDHGB5Q9Y5G0 923 aa13.5□□□□□ -0.25
CDK5RAP3-201ENST00000338399 EML6Q6ZMW3 1958 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 DOCK10Q96BY6 2186 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 A0A0B4J2E0 115 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 A0A1B0GX12 115 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 H0YAE9 185 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 OR6B1O95007 311 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SERPINA7P05543 415 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LIFP15018 202 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CDH2P19022 906 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CLK3P49761 638 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MLF1P58340 268 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 COPZ1P61923 177 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CHAF1BQ13112 559 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RTP5Q14D33 572 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PDK3Q15120 406 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 NTRK2Q16620 822 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 IL20RBQ6UXL0 311 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 WDR88Q6ZMY6 472 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RRM2BQ7LG56 351 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LINC00471Q8N535 108 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 OR10G3Q8NGC4 313 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TTC9Q92623 222 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SPACA9Q96E40 222 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ANKRD60Q9BZ19 345 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RPS6KB2Q9UBS0 482 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 POFUT2Q9Y2G5 429 aa13.49□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 C2orf72A6NCS6 295 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ADAM10O14672 748 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ADAP00813 363 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ENDOUP21128 410 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 IDH2P48735 452 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SSR4P51571 173 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 UGT2B15P54855 530 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF791Q3KP31 576 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TTC23Q5W5X9 447 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 BICRALQ6AI39 1079 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PRICKLE2Q7Z3G6 844 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZER1Q7Z7L7 766 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 VASH2Q86V25 355 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms