RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 DUXAA6NLW8 204 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 GRXCR1A8MXD5 290 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 ACOT7O00154 380 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 MAPK9P45984 424 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SLC11A1P49279 550 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SUOXP51687 545 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 TMEM115Q12893 351 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 RFLNAQ6ZTI6 216 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 FAM122BQ7Z309 247 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 METTL3Q86U44 580 aaKnown RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 ZNF584Q8IVC4 421 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 OR9A1PQ8NGU1 263 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SUN3Q8TAQ9 357 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 AUNIPQ9H7T9 357 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 DNMT3BQ9UBC3 853 aaKnown RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SHPKQ9UHJ6 478 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 RPS10-NUDT3A0A1W2PQS6 291 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 TVP23AA6NH52 213 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 C2orf74A8MZ97 194 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 PRSS3P35030 304 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 RPS10P46783 165 aaKnown RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 EIPR1Q53HC9 387 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 DGLUCYQ7Z3D6 616 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 DCUN1D3Q8IWE4 304 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 OR6V1Q8N148 313 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 OR10Z1Q8NGY1 313 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 OR56A3Q8NH54 315 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SMAP2Q8WU79 429 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 DVL3Q92997 716 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 PLD4Q96BZ4 506 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 C14orf79Q96F83 325 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 C10orf90Q96M02 699 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 NAP1L6A6NFF2 107 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 AGAP14A8MT82 685 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 GRM6O15303 877 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SLC25A12O75746 678 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 ACP5P13686 325 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 ZP3P21754 424 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SLC6A6P31641 620 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SGCGQ13326 291 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 RNASE10Q5GAN6 216 aaKnown RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 RAB41Q5JT25 222 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 PDSS1Q5T2R2 415 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 TMEM65Q6PI78 240 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 CD163Q86VB7 1156 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 ABHD4Q8TB40 342 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 CYB5D2Q8WUJ1 264 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 TRIB3Q96RU7 358 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 NPIPB15A6NHN6 443 aaPredicted RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 SULT1B1O43704 296 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 RRASP10301 218 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 ZNF10P21506 573 aaPredicted RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 STXBP1P61764 594 aaKnown RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 GRHL2Q6ISB3 625 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 TMEM205Q6UW68 189 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 SLC9B2Q86UD5 537 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 ZNF296Q8WUU4 475 aaPredicted RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 VRK1Q99986 396 aaPredicted RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 MACROD1Q9BQ69 325 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 TMEM184CQ9NVA4 438 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 WSB2Q9NYS7 404 aaPredicted RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 A0A1W2PRU2 124 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 SHOXO15266 292 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 MAGEB4O15481 346 aaPredicted RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 COCHO43405 550 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 ACHEP22303 614 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 WASP42768 502 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 XCR1P46094 333 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 RHEBQ15382 184 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 PGGHGQ32M88 737 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 YOD1Q5VVQ6 348 aaPredicted RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 ATCAYQ86WG3 371 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 OR4N5Q8IXE1 308 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 APCDD1Q8J025 514 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 ZNF740Q8NDX6 193 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 NUP43Q8NFH3 380 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 STEAP2Q8NFT2 490 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 OR52B4Q8NGK2 314 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 OR13C5Q8NGS8 318 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 SLC41A3Q96GZ6 507 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 USB1Q9BQ65 265 aaKnown RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 MARVELD1Q9BSK0 173 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 SEMA4CQ9C0C4 833 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 MIXL1Q9H2W2 232 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 SLC7A7Q9UM01 511 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 LAMB1P07942 1786 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 CCSO14618 274 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 PCCBP05166 539 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 HMGN2P05204 90 aaKnown RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 GKN3PP0CG01 181 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 CPEP16870 476 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 AKR1C3P42330 323 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 CLCNKAP51800 687 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 SNRPGP62308 76 aaKnown RBP12.41□□□□□ -0.42
COL2A1-201ENST00000337299 BTN3A2P78410 334 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 CAP1Q01518 475 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
COL2A1-201ENST00000337299 GDPD4Q6W3E5 623 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms