RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 UQCC2Q9BRT2 126 aa11.63□□□□□ -0.55
LIMK1-201ENST00000336180 TRIM45Q9H8W5 580 aaPredicted RBP11.63□□□□□ -0.55
LIMK1-201ENST00000336180 HHATLQ9HCP6 504 aa11.63□□□□□ -0.55
LIMK1-201ENST00000336180 FAIMQ9NVQ4 179 aa11.63□□□□□ -0.55
LIMK1-201ENST00000336180 ERGIC3Q9Y282 383 aa11.63□□□□□ -0.55
LIMK1-201ENST00000336180 SPIN1Q9Y657 262 aaPredicted RBP11.63□□□□□ -0.55
LIMK1-201ENST00000336180 CDHR4A6H8M9 788 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 FAM171A2A8MVW0 826 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 LMO7DNF2Z398 122 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ASNA1O43681 348 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 INHBBP09529 407 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ZGLP1P0C6A0 271 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 SLC35E2P0CK97 266 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 NID1P14543 1247 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 SMSP52788 366 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ARHGEF39Q8N4T4 335 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ZNF524Q96C55 264 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 TCTN2Q96GX1 697 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 TMEM80Q96HE8 168 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 GUCD1Q96NT3 240 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 OR10A5Q9H207 317 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 FN3KQ9H479 309 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 SLC25A19Q9HC21 320 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 MEPEQ9NQ76 525 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ZNF346Q9UL40 294 aaKnown RBP11.62□□□□□ -0.55
LIMK1-201ENST00000336180 A0A1B0GWA3 101 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ANKRD34BA5PLL1 514 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 EFCAB10A6NFE3 127 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 MYL12BO14950 172 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 GTF2E2P29084 291 aaKnown RBP11.62□□□□□ -0.55
LIMK1-201ENST00000336180 NOS3P29474 1203 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 IFNA8P32881 189 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 FASLGP48023 281 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 FXYD6P3P58550 94 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 SIGIRRQ6IA17 410 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 OR5M10Q6IEU7 315 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 LANCL3Q6ZV70 420 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 DEFB123Q8N688 67 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 TMEM239Q8WW34 195 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 CNDP2Q96KP4 475 aaKnown RBP11.62□□□□□ -0.55
LIMK1-201ENST00000336180 DPYSL5Q9BPU6 564 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 IFT27Q9BW83 186 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 OR52D1Q9H346 318 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 HINT3Q9NQE9 182 aaKnown RBP11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ABCB10Q9NRK6 738 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 SNTG1Q9NSN8 517 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 PLCXD1Q9NUJ7 323 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 PCP4L1A6NKN8 68 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 C10orf142B7Z368 130 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 FAM47E-STBD1D6RA91 191 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 DSCR3O14972 297 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 BRINP1O60477 761 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 LALBAP00709 142 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 CDH11P55287 796 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 CDK5Q00535 292 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 CRYZQ08257 329 aaKnown RBP11.62□□□□□ -0.55
LIMK1-201ENST00000336180 TSPAN31Q12999 210 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 SPHARQ15513 63 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 CBLN3Q6UW01 205 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 RANBP3LQ86VV4 465 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-201ENST00000336180 C1orf216Q8TAB5 229 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 FAM174AQ8TBP5 190 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 PIGKQ92643 395 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 DCLRE1CQ96SD1 692 aaKnown RBP11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ZNF559Q9BR84 538 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 CUTCQ9NTM9 273 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 DCAF16Q9NXF7 216 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 CTSFQ9UBX1 484 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 PLCL2Q9UPR0 1127 aa11.62□□□□□ -0.55
LIMK1-201ENST00000336180 ASPMQ8IZT6 3477 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 IGHV1OR21-1A0A087WYE8 117 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 CTDSP2O14595 271 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 PLD2O14939 933 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 ZNF254O75437 659 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 PPP1R3DO95685 299 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 CFIP05156 583 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 ZNHIT3Q15649 155 aaPredicted RBP11.61□□□□□ -0.55
LIMK1-201ENST00000336180 MOGQ16653 247 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 FANK1Q8TC84 345 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 CTHRC1Q96CG8 243 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 SENP5Q96HI0 755 aaPredicted RBP11.61□□□□□ -0.55
LIMK1-201ENST00000336180 TNFRSF13CQ96RJ3 184 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 ADOQ96SZ5 270 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 SLIRPQ9GZT3 109 aaKnown RBP11.61□□□□□ -0.55
LIMK1-201ENST00000336180 PCDHGA3Q9Y5H0 932 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 TTC28Q96AY4 2481 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 FAM221BA6H8Z2 402 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 H3BUI4 141 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 SYT5O00445 386 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 CLDN4O14493 209 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 SLC22A1O15245 554 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 RGS5O15539 181 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 RPLP0P05388 317 aaKnown RBP11.61□□□□□ -0.55
LIMK1-201ENST00000336180 DBIP07108 87 aaKnown RBP11.61□□□□□ -0.55
LIMK1-201ENST00000336180 CT45A8P0DMV1 189 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 CT45A9P0DMV2 189 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 CENPAP49450 140 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 DGUOKQ16854 277 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 CT45A2Q5DJT8 189 aa11.61□□□□□ -0.55
LIMK1-201ENST00000336180 DHRS4L2Q6PKH6 230 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms