RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 NLGN4YQ8NFZ3 816 aaPredicted RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 OR52R1Q8NGF1 315 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 OR6F1Q8NGZ6 308 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 ATF6BQ99941 703 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 JAM3Q9BX67 310 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 FN3KQ9H479 309 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 DDX28Q9NUL7 540 aaKnown RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 MSRAQ9UJ68 235 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 NDRG2Q9UN36 371 aaKnown RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 POLHQ9Y253 713 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 TMEM5Q9Y2B1 443 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 LRP4O75096 1905 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 DAPL1A0PJW8 107 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 A8MV72 311 aaPredicted RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 PRR23D1E9PI22 279 aaPredicted RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 J3QRE1 110 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 DVL2O14641 736 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 FMO6PO60774 539 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 REM1O75628 298 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 SEMA4FO95754 770 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 TNFP01375 233 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 CSF2P04141 144 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 MRPL3P09001 348 aaKnown RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 PRR23D2P0DMB1 279 aaPredicted RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 TYRP1P17643 537 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 DRD1P21728 446 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 APEX1P27695 318 aaKnown RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 MGAT2Q10469 447 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 FZD5Q13467 585 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 ZCCHC12Q6PEW1 402 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 OR51A7Q8NH64 312 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 CTRCQ99895 268 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 OR51V1Q9H2C8 321 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 TMEM27Q9HBJ8 222 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 ASB6Q9NWX5 421 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 USP36Q9P275 1121 aaKnown RBP16.4■□□□□ 0.22
LRCH3-201ENST00000334859 ITGB1BP2Q9UKP3 347 aa16.4■□□□□ 0.22
LRCH3-201ENST00000334859 MEIOCA2RUB1 952 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 RNF13O43567 381 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 HCRTR1O43613 425 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 RGS9O75916 674 aaPredicted RBP16.39■□□□□ 0.21
LRCH3-201ENST00000334859 GSTT2P0CG29 244 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 GSTT2BP0CG30 244 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 SLC2A2P11168 524 aaPredicted RBP16.39■□□□□ 0.21
LRCH3-201ENST00000334859 IL18Q14116 193 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 LCN1P1Q5VSP4 162 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 GARNL3Q5VVW2 1013 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 RPL13AP3Q6NVV1 102 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 TMEM53Q6P2H8 277 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 TMEM91Q6ZNR0 172 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 OOSP2Q86WS3 158 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 Q8N402 240 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 SLC37A3Q8NCC5 494 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 OR9A4Q8NGU2 314 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 ENKURQ8TC29 256 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 CNOT9Q92600 299 aaKnown RBP16.39■□□□□ 0.21
LRCH3-201ENST00000334859 ZNF486Q96H40 463 aaPredicted RBP16.39■□□□□ 0.21
LRCH3-201ENST00000334859 MOV10Q9HCE1 1003 aaKnown RBP16.39■□□□□ 0.21
LRCH3-201ENST00000334859 C14orf105Q9NVL8 296 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 RIIAD1A6NNX1 92 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 UBE2IP63279 158 aaKnown RBP16.39■□□□□ 0.21
LRCH3-201ENST00000334859 MRPS21P82921 87 aaKnown RBP16.39■□□□□ 0.21
LRCH3-201ENST00000334859 FOXK2Q01167 660 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 PLAURQ03405 335 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 DGAT2L6Q6ZPD8 337 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 TAF8Q7Z7C8 310 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 GPBAR1Q8TDU6 330 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 PTCHD1Q96NR3 888 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 DEPDC7Q96QD5 511 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 ZNF559Q9BR84 538 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 GSDMCQ9BYG8 508 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 KCNN2Q9H2S1 579 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 TRIM36Q9NQ86 728 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 CMC2Q9NRP2 79 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 BABAM2Q9NXR7 383 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 SIGLEC7Q9Y286 467 aa16.39■□□□□ 0.21
LRCH3-201ENST00000334859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-201ENST00000334859 GTPBP1O00178 669 aaKnown RBP16.38■□□□□ 0.21
LRCH3-201ENST00000334859 CBX7O95931 251 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 GABRG2P18507 467 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 P2RY14Q15391 338 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 MZT2AQ6P582 158 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 ZNF613Q6PF04 617 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 TMPRSS11FQ6ZWK6 438 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 C19orf18Q8NEA5 215 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 KISS1RQ969F8 398 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-201ENST00000334859 ANKRD9Q96BM1 317 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-201ENST00000334859 RNF32Q9H0A6 362 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 MEPEQ9NQ76 525 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-201ENST00000334859 SIRT4Q9Y6E7 314 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-201ENST00000334859 FAM221BA6H8Z2 402 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 SLC22A31A6NKX4 558 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 CTSBP07858 339 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 NOS3P29474 1203 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 HOXD12P35452 270 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 MAP3K8P41279 467 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 RABIFP47224 123 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 RAB38P57729 211 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 BDH1Q02338 343 aa16.38■□□□□ 0.21
LRCH3-201ENST00000334859 MANEAQ5SRI9 462 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms