RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ACKR4Q9NPB9 350 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 DCAF13Q9NV06 445 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 MSRAQ9UJ68 235 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 RD3LP0DJH9 198 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 CORO1AP31146 461 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 OAZ1P54368 228 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 CDK5Q00535 292 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 LRRC73Q5JTD7 316 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 TEX26Q8N6G2 289 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 BTN2A3PQ96KV6 586 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 VAMP8Q9BV40 100 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 ISYNA1Q9NPH2 558 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 DNMT3AQ9Y6K1 912 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 FANCGO15287 622 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 GPR137BO60478 399 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 AGXTP21549 392 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SULT1A2P50226 295 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 TAS2R46P59540 309 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 NLRC3Q7RTR2 1065 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SLC16A10Q8TF71 515 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 FAM216AQ8WUB2 273 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 REEP6Q96HR9 211 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SPTAN1Q13813 2472 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 A0A1B0GV72 72 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SYNGR4O95473 234 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 G6PDP11413 515 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 RNF144AP50876 292 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 DSC2Q02487 901 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 MICAQ29983 383 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 PDZD11Q5EBL8 140 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF678Q5SXM1 525 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SLC35D2Q76EJ3 337 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 KLBQ86Z14 1044 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 C2CD4AQ8NCU7 369 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 UHRF2Q96PU4 802 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 PITX2Q99697 317 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 AOC2O75106 756 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 CD48P09326 243 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SCGB1C2P0DMR2 95 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 NDUFV1P49821 464 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 TMEM150AQ86TG1 271 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 KDM8Q8N371 416 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 LINC01599Q8WXQ3 324 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SYNPO2LQ9H987 977 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 ATXN7L1Q9ULK2 861 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 KIDINS220Q9ULH0 1771 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 OSMP13725 252 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 YBEYP58557 167 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 LCN6P62502 163 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 NUDT13Q86X67 352 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 TMEM175Q9BSA9 504 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 NUDT9Q9BW91 350 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 FAM166BA8MTA8 275 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 TSPAN6O43657 245 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 OR2T1O43869 369 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 LILRB3O75022 631 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 GLUD1P00367 558 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 LAP3P28838 519 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 HTR4Q13639 388 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SLBPQ14493 270 aaKnown RBP eCLIP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 BEX5Q5H9J7 111 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 APOOLQ6UXV4 268 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 PIWIL3Q7Z3Z3 882 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 CILP2Q8IUL8 1156 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 LIX1LQ8IVB5 337 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 LRRC56Q8IYG6 542 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SIGLECL1Q8N7X8 197 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 C1orf123Q9NWV4 160 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 PURGQ9UJV8 347 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 MED12Q93074 2177 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 C2CD4BA6NLJ0 364 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 PI15O43692 258 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF623O75123 536 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 HSF1Q00613 529 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 Q1RN00 199 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF718Q3SXZ3 478 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 CELF2-AS1Q8N7Q2 184 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 LPPQ93052 612 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 MMABQ96EY8 250 aaPredicted RBP9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 RBP7Q96R05 134 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 NEURL2Q9BR09 285 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 HDHD5Q9BXW7 423 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 SARDHQ9UL12 918 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 CXorf49A8MYA2 514 aaPredicted RBP9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 CCL16O15467 120 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 INSIG1O15503 277 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 ADAM23O75077 832 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 FZD7O75084 574 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 ALDOAP04075 364 aaKnown RBP9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 L1CAMP32004 1257 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 SLC7A9P82251 487 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 LRRC32Q14392 662 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 NHSL2Q5HYW2 709 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 FCRLBQ6BAA4 426 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 LCN10Q6JVE6 187 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 BRICD5Q6PL45 260 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 AMZ2Q86W34 360 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 TMEM173Q86WV6 379 aaPredicted RBP9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 OR5D16Q8NGK9 328 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF558Q96NG5 402 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms