RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ATAD3CQ5T2N8 411 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 HACD4Q5VWC8 232 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 HBMQ6B0K9 141 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 MZT2BQ6NZ67 158 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 ARHGAP11AQ6P4F7 1023 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 CNIH2Q6PI25 160 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 LINC00114Q6XXX2 140 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 TRILQ7L0X0 811 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 SHFQ7M4L6 423 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 OR4N4Q8N0Y3 316 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 CSNK1A1LQ8N752 337 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 SIMC1Q8NDZ2 872 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 FAM174AQ8TBP5 190 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 ANKRD9Q96BM1 317 aaPredicted RBP9.95□□□□□ -0.82
CCDC172-201ENST00000333254 OTULINQ96BN8 352 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 BPIFA2Q96DR5 249 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 NEDD4LQ96PU5 975 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 TIMP4Q99727 224 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 ALG8Q9BVK2 526 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 DPH1Q9BZG8 443 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 RNF32Q9H0A6 362 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 C11orf54Q9H0W9 315 aaPredicted RBP9.95□□□□□ -0.82
CCDC172-201ENST00000333254 RBFOX1Q9NWB1 397 aaKnown RBP9.95□□□□□ -0.82
CCDC172-201ENST00000333254 SERTAD3Q9UJW9 196 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 COL5A1P20908 1838 aaPredicted RBP9.94□□□□□ -0.82
CCDC172-201ENST00000333254 EPOPA6NHQ4 379 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 RIIAD1A6NNX1 92 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 PRR23D1E9PI22 279 aaPredicted RBP9.94□□□□□ -0.82
CCDC172-201ENST00000333254 H0Y8X5 98 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 TMEM127O75204 238 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 SC5DO75845 299 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 SLC2A10O95528 541 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 NTN1O95631 604 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 CBX7O95931 251 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 IGF2P01344 180 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 PRR23D2P0DMB1 279 aaPredicted RBP9.94□□□□□ -0.82
CCDC172-201ENST00000333254 SLC6A6P31641 620 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 ACSL1P33121 698 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 MAP2K3P46734 347 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 TPMTP51580 245 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF141Q15928 474 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 ISXQ2M1V0 245 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 PYDC2Q56P42 97 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 CCNJQ5T5M9 372 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 COL13A1Q5TAT6 717 aaPredicted RBP9.94□□□□□ -0.82
CCDC172-201ENST00000333254 TRIQKQ629K1 86 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 TMEM53Q6P2H8 277 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 PLBD1Q6P4A8 553 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF550Q7Z398 422 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 DGLUCYQ7Z3D6 616 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 RD3Q7Z3Z2 195 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 OOSP2Q86WS3 158 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 LRRC28Q86X40 367 aaPredicted RBP9.94□□□□□ -0.82
CCDC172-201ENST00000333254 KLBQ86Z14 1044 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 LIX1LQ8IVB5 337 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 OR4N5Q8IXE1 308 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 SLC37A3Q8NCC5 494 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 OR51G2Q8NGK0 314 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 SLC7A6Q92536 515 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF578Q96N58 590 aaPredicted RBP9.94□□□□□ -0.82
CCDC172-201ENST00000333254 FRMD6Q96NE9 622 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 TTYH2Q9BSA4 534 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 TMEM43Q9BTV4 400 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 NDC1Q9BTX1 674 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 RNF121Q9H920 327 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 CLEC1BQ9P126 229 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 IL20RAQ9UHF4 553 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 POMT2Q9UKY4 750 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 MRPS2Q9Y399 296 aaKnown RBP9.94□□□□□ -0.82
CCDC172-201ENST00000333254 F5P12259 2224 aa9.94□□□□□ -0.82
CCDC172-201ENST00000333254 OR5K3A6NET4 321 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 NPIPB9F8W1W9 429 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 PRAMEF26H0Y7S4 382 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 PEX12O00623 359 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 SCAMP1O15126 338 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 DNAJB6O75190 326 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 IFNGP01579 166 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 SBK2P0C263 348 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 GSTT2P0CG29 244 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 GSTT2BP0CG30 244 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 FAM157BP0CG42 384 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 PRKAR1AP10644 381 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 SLC2A2P11168 524 aaPredicted RBP9.93□□□□□ -0.82
CCDC172-201ENST00000333254 PEPDP12955 493 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF3P17036 446 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 HK1P19367 917 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 S1PR1P21453 382 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 S100A1P23297 94 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 MYL9P24844 172 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 PBX2P40425 430 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 LSSP48449 732 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 IFITM2Q01629 132 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 GGTLC2Q14390 218 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 QPRTQ15274 297 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 SF3A2Q15428 464 aaKnown RBP9.93□□□□□ -0.82
CCDC172-201ENST00000333254 SHHQ15465 462 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 TCEA2Q15560 299 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF362Q5T0B9 420 aaPredicted RBP9.93□□□□□ -0.82
CCDC172-201ENST00000333254 TIGD3Q6B0B8 471 aa9.93□□□□□ -0.82
CCDC172-201ENST00000333254 PAMR1Q6UXH9 720 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms