RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 CCR4P51679 360 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 ZNF117Q03924 483 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 BNIP1Q12981 228 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 FGFBP1Q14512 234 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 GLYR1Q49A26 553 aaPredicted RBP18.62■□□□□ 0.57
MRPL40-201ENST00000333130 C4orf17Q53FE4 359 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 KRT73Q86Y46 540 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 CMIPQ8IY22 773 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 OR2T12Q8NG77 320 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 ABTB1Q969K4 478 aaPredicted RBP18.62■□□□□ 0.57
MRPL40-201ENST00000333130 PIGQQ9BRB3 760 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 TP63Q9H3D4 680 aaPredicted RBP18.62■□□□□ 0.57
MRPL40-201ENST00000333130 ALG2Q9H553 416 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 ZNF232Q9UNY5 417 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 SLC5A6Q9Y289 635 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 CARD8Q9Y2G2 431 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 MYO7BQ6PIF6 2116 aa18.62■□□□□ 0.57
MRPL40-201ENST00000333130 HEATR5AQ86XA9 2040 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 C17orf51A8MQB3 221 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 MXRA7P84157 204 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 LIPEQ05469 1076 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 VEZF1Q14119 521 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 LARS2Q15031 903 aaKnown RBP18.61■□□□□ 0.57
MRPL40-201ENST00000333130 SF3B4Q15427 424 aaKnown RBP eCLIP18.61■□□□□ 0.57
MRPL40-201ENST00000333130 ZSWIM7Q19AV6 140 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 LIN52Q52LA3 116 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 NHSL2Q5HYW2 709 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 C1QL3Q5VWW1 255 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 RINLQ6ZS11 566 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 DEFB107AQ8IZN7 70 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 FAM71CQ8NEG0 241 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 ZBTB8AQ96BR9 441 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 SPATA5L1Q9BVQ7 753 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 PIF1Q9H611 641 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 SPRR3Q9UBC9 169 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 USP22Q9UPT9 525 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 RPH3AQ9Y2J0 694 aaPredicted RBP18.61■□□□□ 0.57
MRPL40-201ENST00000333130 SLC6A5Q9Y345 797 aa18.61■□□□□ 0.57
MRPL40-201ENST00000333130 GPC6Q9Y625 555 aaPredicted RBP18.61■□□□□ 0.57
MRPL40-201ENST00000333130 FLNCQ14315 2725 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 GCM2O75603 506 aaPredicted RBP18.6■□□□□ 0.57
MRPL40-201ENST00000333130 CYP7B1O75881 506 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 AGFG2O95081 481 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 THBS1P07996 1170 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 NID1P14543 1247 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 TCEA1P23193 301 aaKnown RBP18.6■□□□□ 0.57
MRPL40-201ENST00000333130 CHMP24386 653 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 GSK3BP49841 420 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 KCNJ10P78508 379 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 PLAURQ03405 335 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 CBFBQ13951 182 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 C3AR1Q16581 482 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 CCDC80Q76M96 950 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 CHERPQ8IWX8 916 aaKnown RBP18.6■□□□□ 0.57
MRPL40-201ENST00000333130 MICU2Q8IYU8 434 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 ZNF607Q96SK3 696 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 LAT2Q9GZY6 243 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 TAS2R1Q9NYW7 299 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.6■□□□□ 0.57
MRPL40-201ENST00000333130 TINAGQ9UJW2 476 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 VDAC3Q9Y277 283 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 IFT52Q9Y366 437 aa18.6■□□□□ 0.57
MRPL40-201ENST00000333130 ELOVL7A1L3X0 281 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 PRORSD1PA6NEY8 169 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 LRRTM2O43300 516 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 WDR1O75083 606 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 UBTFL6P0CB48 400 aaPredicted RBP18.59■□□□□ 0.57
MRPL40-201ENST00000333130 GABRA1P14867 456 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 UQCRBP14927 111 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 ZNF17P17021 662 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 PTGER4P35408 488 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 EIF1P41567 113 aaKnown RBP18.59■□□□□ 0.57
MRPL40-201ENST00000333130 RNF144AP50876 292 aaPredicted RBP18.59■□□□□ 0.57
MRPL40-201ENST00000333130 SPATS1Q496A3 300 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 INTS11Q5TA45 600 aaKnown RBP18.59■□□□□ 0.57
MRPL40-201ENST00000333130 VASNQ6EMK4 673 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 FGD2Q7Z6J4 655 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 FJX1Q86VR8 437 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 FAM26EQ8N5C1 309 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 OR52P1PQ8NH57 321 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 GMPR2Q9P2T1 348 aaKnown RBP18.59■□□□□ 0.57
MRPL40-201ENST00000333130 CD300AQ9UGN4 299 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 RELNP78509 3460 aa18.59■□□□□ 0.57
MRPL40-201ENST00000333130 MED12Q93074 2177 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 PHF3Q92576 2039 aaKnown RBP18.58■□□□□ 0.57
MRPL40-201ENST00000333130 CCL21O00585 134 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 ZIC3O60481 467 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 HOXD4P09016 255 aaPredicted RBP18.58■□□□□ 0.57
MRPL40-201ENST00000333130 PABPC4LP0CB38 370 aaKnown RBP18.58■□□□□ 0.57
MRPL40-201ENST00000333130 HSD17B1P14061 328 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 BMP7P18075 431 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 PGCP20142 388 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 PGM1P36871 562 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 SLC6A8P48029 635 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 CRYZQ08257 329 aaKnown RBP18.58■□□□□ 0.57
MRPL40-201ENST00000333130 SKP2Q13309 424 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 FXNQ16595 210 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 GXYLT1Q4G148 440 aa18.58■□□□□ 0.57
MRPL40-201ENST00000333130 SAMD4BQ5PRF9 694 aaKnown RBP18.58■□□□□ 0.57
MRPL40-201ENST00000333130 RNF220Q5VTB9 566 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms