RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 CLDND1Q9NY35 253 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 OBP2AQ9NY56 170 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 FAM86C2PA6NEL3 165 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 RCBTB2O95199 551 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 MAT2AP31153 395 aaKnown RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 TLX1P31314 330 aaPredicted RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 LTBRP36941 435 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 AGFG1P52594 562 aaKnown RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 ATP12AP54707 1039 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 RPS7P62081 194 aaKnown RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 DBPQ10586 325 aaPredicted RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 GPR176Q14439 515 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 SUZ12Q15022 739 aaKnown RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 DEFB134Q4QY38 66 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 MRPL2Q5T653 305 aaKnown RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 FBXO42Q6P3S6 717 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 IL20RBQ6UXL0 311 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 YAF2Q8IY57 180 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 SLC37A3Q8NCC5 494 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 OR4M1Q8NGD0 313 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 PTP4A1Q93096 173 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 KCTD12Q96CX2 325 aaKnown RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 SERINC2Q96SA4 455 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 THAP7Q9BT49 309 aaPredicted RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 FGF22Q9HCT0 170 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 CMC2Q9NRP2 79 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 TBC1D29Q9UFV1 150 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 KLF15Q9UIH9 416 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 MYO15AQ9UKN7 3530 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 SLC22A31A6NKX4 558 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 PRR23D1E9PI22 279 aaPredicted RBP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 PLOD3O60568 738 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 DNAJB6O75190 326 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 ZNF780AO75290 641 aaPredicted RBP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 STX11O75558 287 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 MT-ND5P03915 603 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 DBIP07108 87 aaKnown RBP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 PRR23D2P0DMB1 279 aaPredicted RBP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 SLC6A1P30531 599 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 SLC16A1P53985 500 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 RAB25P57735 213 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 FOXK2Q01167 660 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 MAB21L1Q13394 359 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 ENPP2Q13822 863 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 RUNX2Q13950 521 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 TCEA2Q15560 299 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 DCST2Q5T1A1 773 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 FAM27D1Q5T7N8 215 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 ASB18Q6ZVZ8 466 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 USP53Q70EK8 1073 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 CDK20Q8IZL9 346 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 DTX3Q8N9I9 347 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 DOK4Q8TEW6 326 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 AKAP1Q92667 903 aaKnown RBP eCLIP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 RFT1Q96AA3 541 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 TEAD3Q99594 435 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 NDC1Q9BTX1 674 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 IFT27Q9BW83 186 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 SLC6A17Q9H1V8 727 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 OR51V1Q9H2C8 321 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 ADAP2Q9NPF8 381 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 INPP5EQ9NRR6 644 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 E9PI62 339 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 PLPP2O43688 288 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 LANCL1O43813 399 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 EML2O95834 649 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 PAHP00439 452 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 APODP05090 189 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 EIF4EP06730 217 aaKnown RBP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 CPMP14384 443 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 NID1P14543 1247 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 CD53P19397 219 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 RPS4Y1P22090 263 aaKnown RBP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 THBS2P35442 1172 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 RFX3P48380 749 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 BICRALQ6AI39 1079 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 RPL13AP3Q6NVV1 102 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 THSD4Q6ZMP0 1018 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 OAFQ86UD1 273 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 SAMD12Q8N8I0 201 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 DEDD2Q8WXF8 326 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 TRAF4Q9BUZ4 470 aaPredicted RBP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 GTPBP2Q9BX10 602 aaKnown RBP14.24□□□□□ -0.13
BRCC3-201ENST00000330045 DAPP1Q9UN19 280 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 RASD1Q9Y272 281 aa14.24□□□□□ -0.13
BRCC3-201ENST00000330045 LYPD3O95274 346 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 SMIM10L1P0DMW3 83 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 RBMS1P29558 406 aaKnown RBP14.23□□□□□ -0.13
BRCC3-201ENST00000330045 ACSL1P33121 698 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 PITPNBP48739 271 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 GNG2P59768 71 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 SHC2P98077 582 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 ID2Q02363 134 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 SLC3A1Q07837 685 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 TRAM1Q15629 374 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 ZNF776Q68DI1 518 aaPredicted RBP14.23□□□□□ -0.13
BRCC3-201ENST00000330045 SFXN4Q6P4A7 337 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 TPRA1Q86W33 373 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 GPALPP1Q8IXQ4 340 aa14.23□□□□□ -0.13
BRCC3-201ENST00000330045 CADM2Q8N3J6 435 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms