RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 SOX2P48431 317 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 ARSJQ5FYB0 599 aaPredicted RBP13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 SLC6A19Q695T7 634 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 VHLLQ6RSH7 139 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 PLEKHG7Q6ZR37 379 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 SLC38A5Q8WUX1 472 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 SPRYD4Q8WW59 207 aaPredicted RBP13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 RLIMQ9NVW2 624 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 GRIP1Q9Y3R0 1128 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 GGT3PA6NGU5 568 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 FIGNL2A6NMB9 653 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 ENO4A6NNW6 628 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 PPP1R3DO95685 299 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 LCATP04180 440 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 ZNF806P0C7X5 589 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 EIF1P41567 113 aaKnown RBP13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 CDKN2CP42773 168 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 STT3AP46977 705 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 ALDH3A2P51648 485 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 IST1P53990 364 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 MCCD1P59942 119 aaPredicted RBP13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 CCNIQ14094 377 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 GFRALQ6UXV0 394 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 LANCL3Q6ZV70 420 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 MORN4Q8NDC4 146 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 THAP4Q8WY91 577 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 SAMD8Q96LT4 415 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 TMEM45AQ9NWC5 275 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 SDK2Q58EX2 2172 aa13.37□□□□□ -0.27
SYNGR1-203ENST00000328933 TEX51A0A1B0GUA7 166 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 GCH1P30793 250 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 PRPS1P60891 318 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 SLC14A1Q13336 389 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 ARFRP1Q13795 201 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 RNASE12Q5GAN4 147 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 SERPINA11Q86U17 422 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 C16orf52Q8NHV5 167 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 DNASE2BQ8WZ79 361 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 ISL2Q96A47 359 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 ZC3HAV1LQ96H79 300 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 B3GNT4Q9C0J1 378 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 SP140LQ9H930 580 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 DYNLRB1Q9NP97 96 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 RXFP3Q9NSD7 469 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 MCUBQ9NWR8 336 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 CRNNQ9UBG3 495 aaPredicted RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 FBXL4Q9UKA2 621 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 PLATP00750 562 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 WNT1P04628 370 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 ARAFP10398 606 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 HSD17B1P14061 328 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 ID4P47928 161 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 OR1Q1Q15612 314 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 DUSP5Q16690 384 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 FIP1L1Q6UN15 594 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 NDUFAF7Q7L592 441 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 BPIFA2Q96DR5 249 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 CSF3RQ99062 836 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 TRIM36Q9NQ86 728 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 INIPQ9NRY2 104 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 NOSIPQ9Y314 301 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 IER3IP1Q9Y5U9 82 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 PTPRFP10586 1907 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 HYAL3O43820 417 aaPredicted RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 BMP4P12644 408 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 SCN1BQ07699 218 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 CSRP2Q16527 193 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 TMEM102Q8N9M5 508 aaPredicted RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 OR5M1Q8NGP8 315 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 APOBEC4Q8WW27 367 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 FBXL20Q96IG2 436 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 TOR3AQ9H497 397 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 F5H5K5 113 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 SUSD5O60279 629 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 IRF2P14316 349 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 APLNRP35414 380 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 DAP3P51398 398 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 ERVK-25P63136 954 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 HBMQ6B0K9 141 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 XKR5Q6UX68 686 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 ANKRD53Q8N9V6 530 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 ZNF300Q96RE9 604 aaPredicted RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 NXF5Q9H1B4 397 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 TMEM9Q9P0T7 183 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 PAIP2BQ9ULR5 123 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 RAB26Q9ULW5 256 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 BTBD3Q9Y2F9 522 aa13.36□□□□□ -0.27
SYNGR1-203ENST00000328933 MAP4K2Q12851 820 aa13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 AIMP2Q13155 320 aaKnown RBP13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 NRTNQ99748 197 aa13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 TUBB1Q9H4B7 451 aa13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 ABCB9Q9NP78 766 aa13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 GLS2Q9UI32 602 aa13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 C19orf53Q9UNZ5 99 aaPredicted RBP13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 PI4KAP42356 2102 aa13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 VGLL3A8MV65 326 aa13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 RPL5P46777 297 aaKnown RBP13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 CRISP1P54107 249 aa13.35□□□□□ -0.27
SYNGR1-203ENST00000328933 MLC1Q15049 377 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms