RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 PCM1Q15154 2024 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 LOC105369274A0A096LPK9 316 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 H2AFB2P0C5Z0 115 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 PGCP20142 388 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 FBLP22087 321 aaKnown RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 PKLRP30613 574 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 TRIM23P36406 574 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 PITPNBP48739 271 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 KCNJ8Q15842 424 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 DEFB133Q30KQ1 61 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 PLK5Q496M5 336 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 C3orf38Q5JPI3 329 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 LYSMD2Q8IV50 215 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 OR4N4Q8N0Y3 316 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 SUN5Q8TC36 379 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 TMEM234Q8WY98 164 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 ARSGQ96EG1 525 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 ZNF486Q96H40 463 aaPredicted RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 GABARAPL3Q9BY60 117 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 TRPM6Q9BX84 2022 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 C5orf51A6NDU8 294 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 TVP23AA6NH52 213 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 FCMRO60667 390 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 HEXBP07686 556 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 CD3GP09693 182 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 LCN1P31025 176 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 MRPL19P49406 292 aaKnown RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 GDI2P50395 445 aaKnown RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 MAT1AQ00266 395 aaKnown RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 SYT14P1Q58G82 188 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 ALG10Q5BKT4 473 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 TCTE1Q5JU00 501 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 MFSD12Q6NUT3 480 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 C8orf82Q6P1X6 216 aaPredicted RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 ULK3Q6PHR2 472 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 SHISA6Q6ZSJ9 500 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 CELF2-AS1Q8N7Q2 184 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 DYNC2LI1Q8TCX1 351 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 CCDC107Q8WV48 283 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 HHIPQ96QV1 700 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 FOLH1BQ9HBA9 442 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 DIMT1Q9UNQ2 313 aaKnown RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 CACNA1IQ9P0X4 2223 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 PTPRFP10586 1907 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 SYT5O00445 386 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 WISP3O95389 354 aaPredicted RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 GTF2F2P13984 249 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 ERP29P30040 261 aaKnown RBP12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 BSGP35613 385 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 CHAF1BQ13112 559 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 TMEM225Q6GV28 225 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 SLC25A24Q6NUK1 477 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 FKBP10Q96AY3 582 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 SLC25A18Q9H1K4 315 aa12.86□□□□□ -0.35
DNMT3B-202ENST00000328111 FAM221BA6H8Z2 402 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 LRRTM2O43300 516 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 LGI1O95970 557 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 SERTAD2Q14140 314 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 PRAMEF17Q5VTA0 474 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 XAF1Q6GPH4 301 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 THOC7Q6I9Y2 204 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 PYHIN1Q6K0P9 492 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 LRRC56Q8IYG6 542 aaPredicted RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 CADM3Q8N126 398 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 ZNF566Q969W8 418 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 TRPV4Q9HBA0 871 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 PLCXD1Q9NUJ7 323 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 RBM7Q9Y580 266 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 ZFC3H1O60293 1989 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 KCNE1BA0A087WTH5 132 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 TEX13CA0A0J9YWL9 993 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 CDC14CA4D256 554 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 ZAR1LA6NP61 321 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 DUX1O43812 170 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 UCHL1P09936 223 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 MAGEA8P43361 318 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 CRMP1Q14194 572 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 TRMT12Q53H54 448 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 GDF7Q7Z4P5 450 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 SLC35F2Q8IXU6 374 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 PATE1Q8WXA2 126 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 PIGUQ9H490 435 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 TEAD1P28347 426 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 GABRA5P31644 462 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 EIF2DP41214 584 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 MAGEA2P43356 314 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 AGAP7PQ5VUJ5 663 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 GLT8D1Q68CQ7 371 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 MBOAT2Q6ZWT7 520 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 C7orf34Q96L11 122 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 THAP7Q9BT49 309 aaPredicted RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 MKRN2Q9H000 416 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 ATG5Q9H1Y0 275 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 ZNF226Q9NYT6 803 aa12.85□□□□□ -0.35
DNMT3B-202ENST00000328111 GMEB2Q9UKD1 530 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms