RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 AIMP2Q13155 320 aaKnown RBP16.53■□□□□ 0.24
SYNE4-201ENST00000324444 TRAM2Q15035 370 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 MICAQ29983 383 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 OTUD3Q5T2D3 398 aaPredicted RBP16.53■□□□□ 0.24
SYNE4-201ENST00000324444 H3F3CQ6NXT2 135 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 ZNF613Q6PF04 617 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 RRM2BQ7LG56 351 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 HMGN2P46Q86SG4 172 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 PRR22Q8IZ63 422 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 GALNT4Q8N4A0 578 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 PHOSPHO1Q8TCT1 267 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 THAP3Q8WTV1 239 aaPredicted RBP16.53■□□□□ 0.24
SYNE4-201ENST00000324444 ZNF597Q96LX8 424 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 ALPK1Q96QP1 1244 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 OSBPL11Q9BXB4 747 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 ZNF556Q9HAH1 456 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 ZBTB20Q9HC78 741 aaPredicted RBP16.53■□□□□ 0.24
SYNE4-201ENST00000324444 ACER3Q9NUN7 267 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 DNAJB12Q9NXW2 375 aaKnown RBP16.53■□□□□ 0.24
SYNE4-201ENST00000324444 PDP1Q9P0J1 537 aaPredicted RBP16.53■□□□□ 0.24
SYNE4-201ENST00000324444 ABI3Q9P2A4 366 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 KIF17Q9P2E2 1029 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 RAB26Q9ULW5 256 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 A4GNTQ9UNA3 340 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 CHST2Q9Y4C5 530 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 U3KQV3 271 aa16.53■□□□□ 0.24
SYNE4-201ENST00000324444 TRAPPC13A5PLN9 417 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 B8ZZF3 427 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 EI24O14681 340 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 NKX2-8O15522 239 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 ICOSLGO75144 302 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 UGT2B11O75310 529 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 ITGA10O75578 1167 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 OR2J2O76002 312 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 NADKO95544 446 aaPredicted RBP16.52■□□□□ 0.24
SYNE4-201ENST00000324444 PRKAR1AP10644 381 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 EVI2BP34910 448 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 YAP1P46937 504 aaKnown RBP16.52■□□□□ 0.24
SYNE4-201ENST00000324444 NTRK2Q16620 822 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 CRTC2Q53ET0 693 aaPredicted RBP16.52■□□□□ 0.24
SYNE4-201ENST00000324444 ENTPD8Q5MY95 495 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 RBM45Q8IUH3 476 aaKnown RBP16.52■□□□□ 0.24
SYNE4-201ENST00000324444 EPHX4Q8IUS5 362 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 LACC1Q8IV20 430 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 LSMEM1Q8N8F7 131 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 CLEC1AQ8NC01 280 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 OR4D11Q8NGI4 311 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 OR4C15Q8NGM1 316 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 MAGEE2Q8TD90 523 aaPredicted RBP16.52■□□□□ 0.24
SYNE4-201ENST00000324444 ASB15Q8WXK1 588 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 SPACA9Q96E40 222 aaPredicted RBP16.52■□□□□ 0.24
SYNE4-201ENST00000324444 LMF1Q96S06 567 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 RASL10BQ96S79 203 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 LAT2Q9GZY6 243 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 SMPD3Q9NY59 655 aaPredicted RBP16.52■□□□□ 0.24
SYNE4-201ENST00000324444 RPS6KB2Q9UBS0 482 aa16.52■□□□□ 0.24
SYNE4-201ENST00000324444 CENPVL1A0A0U1RR11 272 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 J3KTA2 159 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 PDLIM1O00151 329 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 SOCS2O14508 198 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 FADS1O60427 444 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 CYP7B1O75881 506 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 LIMS1P48059 325 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 ZNF136P52737 540 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 MLF1P58340 268 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 C17orf67Q0P5P2 114 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 CDC20Q12834 499 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 NFATC3Q12968 1075 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 SNTA1Q13424 505 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 PIN1Q13526 163 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-201ENST00000324444 GANABQ14697 944 aaKnown RBP16.51■□□□□ 0.23
SYNE4-201ENST00000324444 NPTX1Q15818 432 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 MEP1AQ16819 746 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 FGD3Q5JSP0 725 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 SWT1Q5T5J6 900 aaKnown RBP16.51■□□□□ 0.23
SYNE4-201ENST00000324444 FNDC7Q5VTL7 733 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 TMEM81Q6P7N7 255 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 BORAQ6PGQ7 559 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 ATG16L2Q8NAA4 619 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 POGLUT1Q8NBL1 392 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 FAM71CQ8NEG0 241 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 ADAMTS16Q8TE57 1224 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 CNOT9Q92600 299 aaKnown RBP16.51■□□□□ 0.23
SYNE4-201ENST00000324444 MPP4Q96JB8 637 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 HS6ST2Q96MM7 605 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 RSPO3Q9BXY4 272 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-201ENST00000324444 CDCP1Q9H5V8 836 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 C15orf41Q9Y2V0 281 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 CLDN24A6NM45 220 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 FFAR1O14842 300 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 ALPLP05186 524 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 LINGO3P0C6S8 592 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 UBTFL6P0CB48 400 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-201ENST00000324444 MSX1P28360 303 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 AQP4P55087 323 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 PPP2R2BQ00005 443 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 ATP1A4Q13733 1029 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 OR1Q1Q15612 314 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 EXOC3L2Q2M3D2 409 aa16.51■□□□□ 0.23
SYNE4-201ENST00000324444 CMPK2Q5EBM0 449 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms