RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 FARSAQ9Y285 508 aaKnown RBP13.78□□□□□ -0.2
TCOF1-201ENST00000323668 RHPN2P1A8MT19 583 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 KHNYNO15037 678 aaKnown RBP13.77□□□□□ -0.2
TCOF1-201ENST00000323668 MAS1P04201 325 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 FUT1P19526 365 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 TGM4P49221 684 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 LIM2P55344 173 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 ZMAT1Q5H9K5 638 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 MRPL2Q5T653 305 aaKnown RBP13.77□□□□□ -0.2
TCOF1-201ENST00000323668 LEG1Q6P5S2 330 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 DNM1P34Q6PK57 102 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 FAM198BQ6UWH4 519 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 ELP4Q96EB1 424 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 TOX2Q96NM4 488 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 APOOQ9BUR5 198 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 INIPQ9NRY2 104 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 F5P12259 2224 aa13.77□□□□□ -0.2
TCOF1-201ENST00000323668 TPBGQ13641 420 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 FAM69AQ5T7M9 428 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 SFXN4Q6P4A7 337 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 ABHD17CQ6PCB6 329 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 TMEM64Q6YI46 380 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 SERPINA12Q8IW75 414 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 OR2T4Q8NH00 348 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 IL23AQ9NPF7 189 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-201ENST00000323668 SH2B3Q9UQQ2 575 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 PPIL1Q9Y3C6 166 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 TRIM64A6NGJ6 449 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 LDB3O75112 727 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 ZNF432O94892 652 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 CSF3P09919 207 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 GP1BBP13224 206 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 HLA-DMAP28067 261 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 RAE1P78406 368 aaKnown RBP13.77□□□□□ -0.21
TCOF1-201ENST00000323668 IRF4Q15306 451 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 OR13C2Q8NGS9 318 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 MMABQ96EY8 250 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-201ENST00000323668 ZBP1Q9H171 429 aa13.77□□□□□ -0.21
TCOF1-201ENST00000323668 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-201ENST00000323668 HIDE1A8MVS5 230 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ALX3O95076 343 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 AHSA1O95433 338 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 CYB5AP00167 134 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 FNTBP49356 437 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 FCN2Q15485 313 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 SWI5Q1ZZU3 235 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 SLC48A1Q6P1K1 146 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ADAMTSL4Q6UY14 1074 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 CREB3L2Q70SY1 520 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ABHD4Q8TB40 342 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 GHSRQ92847 366 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 HAVCR1Q96D42 359 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ATG5Q9H1Y0 275 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 LOC100509620A0A075B734 347 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 A0A0X1KG70 313 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 FAM171A2A8MVW0 826 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 C11orf98E9PRG8 122 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 DSCR3O14972 297 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 SMAD9O15198 467 aaKnown RBP13.76□□□□□ -0.21
TCOF1-201ENST00000323668 MT-ND4P03905 459 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 CPMP14384 443 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 PSMB10P40306 273 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 OR3A3P47888 321 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 OR3A2P47893 321 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 HMGA2P52926 109 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 LTB4RQ15722 352 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ZNF322Q6U7Q0 402 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-201ENST00000323668 WASH2PQ6VEQ5 465 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 OR56B4Q8NH76 319 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 TMEM255BQ8WV15 326 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 TM7SF3Q9NS93 570 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 TRAPPC4Q9Y296 219 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 CACNA1CQ13936 2221 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 LRIT2A6NDA9 550 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ARPC1BO15143 372 aaKnown RBP13.76□□□□□ -0.21
TCOF1-201ENST00000323668 CDC40O60508 579 aaKnown RBP eCLIP13.76□□□□□ -0.219e-7■■■□□ 18.5
TCOF1-201ENST00000323668 FRKP42685 505 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-201ENST00000323668 CTXN1P60606 82 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 KIR2DS3Q14952 304 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 PRAMEF8Q5VWM4 474 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 PRAMEF7Q5VXH5 474 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 RTL10Q7L3V2 364 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 GALNTL5Q7Z4T8 443 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 NKAIN4Q8IVV8 208 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ZNF440Q8IYI8 595 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 SLC16A11Q8NCK7 471 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 GALNT6Q8NCL4 622 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 OR5AK2Q8NH90 309 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 MRI1Q9BV20 369 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 FTSJ1Q9UET6 329 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 HCRTR2O43614 444 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 SPARCP09486 303 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 TEAD1P28347 426 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 ATXN7L3Q14CW9 347 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-201ENST00000323668 METRNLQ641Q3 311 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 LYPD4Q6UWN0 246 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms