RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 LCN1P31025 176 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 RPL3P39023 403 aaKnown RBP11.01□□□□□ -0.65
TPM3-204ENST00000323144 ETV4P43268 484 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 PTH2RP49190 550 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 CCT3P49368 545 aaKnown RBP11.01□□□□□ -0.65
TPM3-204ENST00000323144 CCR4P51679 360 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 HBA1P69905 142 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 IFFO1Q0D2I5 559 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 PDZK1Q5T2W1 519 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 CPTPQ5TA50 214 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 SHEQ5VZ18 495 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 CLEC9AQ6UXN8 241 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 TFAP2EQ6VUC0 442 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 ZNF704Q6ZNC4 412 aaPredicted RBP11.01□□□□□ -0.65
TPM3-204ENST00000323144 C20orf204Q6ZNR8 217 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.01□□□□□ -0.65
TPM3-204ENST00000323144 NUFIP2Q7Z417 695 aaKnown RBP11.01□□□□□ -0.65
TPM3-204ENST00000323144 YTHDF3Q7Z739 585 aaKnown RBP11.01□□□□□ -0.65
TPM3-204ENST00000323144 P3H2Q8IVL5 708 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 LILRA2Q8N149 483 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 ZNF619Q8N2I2 560 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 ATP6V1C2Q8NEY4 427 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 RFWD2Q8NHY2 731 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 FBXO27Q8NI29 283 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 ZFP90Q8TF47 636 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 IGFBPL1Q8WX77 278 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 ZBTB9Q96C00 473 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 TUBGCP3Q96CW5 907 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 SLC35G5Q96KT7 338 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 PIP5K1AQ99755 562 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 EML4Q9HC35 981 aaKnown RBP11.01□□□□□ -0.65
TPM3-204ENST00000323144 KLHL13Q9P2N7 655 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 DNHD1Q96M86 4753 aa11□□□□□ -0.65
TPM3-204ENST00000323144 RNF103-CHMP3A0A140T963 221 aa11□□□□□ -0.65
TPM3-204ENST00000323144 A0A1W2PNR3 127 aa11□□□□□ -0.65
TPM3-204ENST00000323144 SMAD7O15105 426 aaKnown RBP11□□□□□ -0.65
TPM3-204ENST00000323144 BCAS1O75363 584 aaPredicted RBP11□□□□□ -0.65
TPM3-204ENST00000323144 GCM2O75603 506 aaPredicted RBP11□□□□□ -0.65
TPM3-204ENST00000323144 C1QCP02747 245 aa11□□□□□ -0.65
TPM3-204ENST00000323144 HEXAP06865 529 aa11□□□□□ -0.65
TPM3-204ENST00000323144 UBL4AP11441 157 aa11□□□□□ -0.65
TPM3-204ENST00000323144 P2RX1P51575 399 aa11□□□□□ -0.65
TPM3-204ENST00000323144 CASP9P55211 416 aa11□□□□□ -0.65
TPM3-204ENST00000323144 SUMO3P55854 103 aaPredicted RBP11□□□□□ -0.65
TPM3-204ENST00000323144 PLAURQ03405 335 aa11□□□□□ -0.65
TPM3-204ENST00000323144 FUT5Q11128 374 aa11□□□□□ -0.65
TPM3-204ENST00000323144 KLHL26Q53HC5 615 aa11□□□□□ -0.65
TPM3-204ENST00000323144 BEX5Q5H9J7 111 aa11□□□□□ -0.65
TPM3-204ENST00000323144 OR4F3Q6IEY1 312 aa11□□□□□ -0.65
TPM3-204ENST00000323144 ALKBH2Q6NS38 261 aa11□□□□□ -0.65
TPM3-204ENST00000323144 SEZ6L2Q6UXD5 910 aa11□□□□□ -0.65
TPM3-204ENST00000323144 HMGN2P46Q86SG4 172 aa11□□□□□ -0.65
TPM3-204ENST00000323144 LRRC75A-AS1Q8N1F1 130 aa11□□□□□ -0.65
TPM3-204ENST00000323144 ZNF781Q8N8C0 355 aa11□□□□□ -0.65
TPM3-204ENST00000323144 ZNF527Q8NB42 609 aa11□□□□□ -0.65
TPM3-204ENST00000323144 RAB3IL1Q8TBN0 382 aa11□□□□□ -0.65
TPM3-204ENST00000323144 ADAMTS15Q8TE58 950 aa11□□□□□ -0.65
TPM3-204ENST00000323144 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11□□□□□ -0.651e-8■■■■■ 76.2
TPM3-204ENST00000323144 S100PBPQ96BU1 408 aa11□□□□□ -0.65
TPM3-204ENST00000323144 COQ8BQ96D53 544 aa11□□□□□ -0.65
TPM3-204ENST00000323144 PLPPR2Q96GM1 343 aa11□□□□□ -0.65
TPM3-204ENST00000323144 DUSP26Q9BV47 211 aa11□□□□□ -0.65
TPM3-204ENST00000323144 BHLHE41Q9C0J9 482 aaPredicted RBP11□□□□□ -0.65
TPM3-204ENST00000323144 QRSL1Q9H0R6 528 aaKnown RBP11□□□□□ -0.65
TPM3-204ENST00000323144 PLSCR4Q9NRQ2 329 aa11□□□□□ -0.65
TPM3-204ENST00000323144 ATAD3AQ9NVI7 634 aa11□□□□□ -0.65
TPM3-204ENST00000323144 PAQR5Q9NXK6 330 aaPredicted RBP11□□□□□ -0.65
TPM3-204ENST00000323144 KCNE5Q9UJ90 142 aa11□□□□□ -0.65
TPM3-204ENST00000323144 FAF1Q9UNN5 650 aaPredicted RBP11□□□□□ -0.65
TPM3-204ENST00000323144 ESPNB1AK53 854 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 CFLARO15519 480 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 HSPA4LO95757 839 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 LY6G6DO95868 133 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 PSMB1P20618 241 aaKnown RBP10.99□□□□□ -0.65
TPM3-204ENST00000323144 FPR1P21462 350 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 SERPINB5P36952 375 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 ATP12AP54707 1039 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 SELENBP1Q13228 472 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 SKP2Q13309 424 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 QPRTQ15274 297 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 FCRLAQ7L513 359 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 MTERF4Q7Z6M4 381 aaKnown RBP10.99□□□□□ -0.65
TPM3-204ENST00000323144 ANKRD46Q86W74 232 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 TUSC5Q8IXB3 177 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 GABRG1Q8N1C3 465 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 GPR119Q8TDV5 335 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 OSTF1Q92882 214 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 PIGTQ969N2 578 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 CPNE4Q96A23 557 aaPredicted RBP10.99□□□□□ -0.65
TPM3-204ENST00000323144 TMEM204Q9BSN7 226 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 ASIC5Q9NY37 505 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 STOML1Q9UBI4 398 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 ING1Q9UK53 422 aaPredicted RBP10.99□□□□□ -0.65
TPM3-204ENST00000323144 ACTL7BQ9Y614 415 aa10.99□□□□□ -0.65
TPM3-204ENST00000323144 WDR91A4D1P6 747 aa10.98□□□□□ -0.65
TPM3-204ENST00000323144 C9JVG2 144 aa10.98□□□□□ -0.65
TPM3-204ENST00000323144 ZNF195O14628 629 aa10.98□□□□□ -0.65
TPM3-204ENST00000323144 SMAD9O15198 467 aaKnown RBP10.98□□□□□ -0.65
TPM3-204ENST00000323144 KIAA0513O60268 411 aa10.98□□□□□ -0.65
TPM3-204ENST00000323144 KRT16P08779 473 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms