RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 DUSP5Q16690 384 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 GALNTL6Q49A17 601 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 HBMQ6B0K9 141 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 CLEC9AQ6UXN8 241 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 C20orf204Q6ZNR8 217 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 BEND4Q6ZU67 534 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 C22orf34Q6ZV56 151 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 ESPNLQ6ZVH7 1005 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 MTERF4Q7Z6M4 381 aaKnown RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 ZAR1Q86SH2 424 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 TRABD2AQ86V40 505 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 DDIASQ8IXT1 998 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 LILRA2Q8N149 483 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 NATD1Q8N6N6 113 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 COX18Q8N8Q8 333 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 GATSQ8NAP1 163 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 VPS37AQ8NEZ2 397 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 CLHC1Q8NHS4 586 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 B4GALNT2Q8NHY0 566 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 FBXO30Q8TB52 745 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 OSTF1Q92882 214 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 FAM120BQ96EK7 910 aaKnown RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 C16orf58Q96GQ5 468 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 MARK4Q96L34 752 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 CCL19Q99731 98 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 NPAS1Q99742 590 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 BTBD2Q9BX70 525 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 HOXD1Q9GZZ0 328 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 UBTD1Q9HAC8 227 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 BRD7Q9NPI1 651 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 MED17Q9NVC6 651 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 GIN1Q9NXP7 522 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 ATP6V1HQ9UI12 483 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 CLEC4AQ9UMR7 237 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 POLR3KQ9Y2Y1 108 aaPredicted RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 A0A0J9YW62 118 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 TNFSF11O14788 317 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 PIP5K1BO14986 540 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 NPHS1O60500 1241 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 PEX11AO75192 247 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 HMGN2P05204 90 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 THBDP07204 575 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 PABPC4LP0CB38 370 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 EFNA1P20827 205 aaPredicted RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 ATP6V1C1P21283 382 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 LOXP28300 417 aaPredicted RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 ALDH3A1P30838 453 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 CCKARP32238 428 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 HPCAL1P37235 193 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 CCT3P49368 545 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 CTU2Q2VPK5 515 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 PLPPR5Q32ZL2 321 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 LSM12Q3MHD2 195 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 ARL13AQ5H913 290 aaPredicted RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 BEX5Q5H9J7 111 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 Q5PR19 223 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 EXOSC6Q5RKV6 272 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 CCNJQ5T5M9 372 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 STAC2Q6ZMT1 411 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 PLEKHM3Q6ZWE6 761 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 STK32CQ86UX6 486 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 BANPQ8N9N5 519 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 ZNF527Q8NB42 609 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 LRRN4CLQ8ND94 238 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 OR7A2PQ8NGA2 310 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 OR2V1Q8NHB1 315 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 POC1BQ8TC44 478 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 PHOSPHO1Q8TCT1 267 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 TWIST2Q8WVJ9 160 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 OR5P2Q8WZ92 322 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 JADE3Q92613 823 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 CDS1Q92903 461 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 CHMP6Q96FZ7 201 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 SH3YL1Q96HL8 342 aaPredicted RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 REXO5Q96IC2 774 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 ADGRG7Q96K78 797 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 PPP3R2Q96LZ3 170 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 RNF145Q96MT1 663 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 STACQ99469 402 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 PRPF18Q99633 342 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 BDH2Q9BUT1 245 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 HDHD5Q9BXW7 423 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 PIGUQ9H490 435 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 TIGARQ9NQ88 270 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 DUSP22Q9NRW4 184 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 SIRT3Q9NTG7 399 aaPredicted RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 ZCCHC3Q9NUD5 404 aaKnown RBP7.28□□□□□ -1.24
TPM3-203ENST00000312970 GPR52Q9Y2T5 361 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 SNX8Q9Y5X2 465 aa7.28□□□□□ -1.24
TPM3-203ENST00000312970 GJE1A6NN92 205 aa7.27□□□□□ -1.25
TPM3-203ENST00000312970 TMEM233B4DJY2 109 aa7.27□□□□□ -1.25
TPM3-203ENST00000312970 H3BNH8 94 aa7.27□□□□□ -1.25
TPM3-203ENST00000312970 GTPBP1O00178 669 aaKnown RBP7.27□□□□□ -1.25
TPM3-203ENST00000312970 ZNF195O14628 629 aa7.27□□□□□ -1.25
TPM3-203ENST00000312970 SCAMP2O15127 329 aaKnown RBP7.27□□□□□ -1.25
TPM3-203ENST00000312970 EFNA2O43921 213 aa7.27□□□□□ -1.25
TPM3-203ENST00000312970 LYPLA1O75608 230 aaPredicted RBP7.27□□□□□ -1.25
TPM3-203ENST00000312970 SLU7O95391 586 aaKnown RBP7.27□□□□□ -1.25
TPM3-203ENST00000312970 NUDT14O95848 222 aa7.27□□□□□ -1.25
TPM3-203ENST00000312970 LY6G6DO95868 133 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms