RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 GPR119Q8TDV5 335 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 TREX2Q9BQ50 279 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-201ENST00000311943 SDHAF3Q9NRP4 125 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-201ENST00000311943 NDUFAF1Q9Y375 327 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 MED12LQ86YW9 2145 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 A0A1W2PQD3 144 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 FIGNL2A6NMB9 653 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 H0Y3Z8 333 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 FXYD1O00168 92 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 ZNF264O43296 627 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 TPST1O60507 370 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 AQP8O94778 261 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 EPPINO95925 133 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 UBL4AP11441 157 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 CLK3P49761 638 aaKnown RBP10.85□□□□□ -0.67
SCFD1-201ENST00000311943 FGFBP1Q14512 234 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 QPRTQ15274 297 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 CTU2Q2VPK5 515 aaKnown RBP10.85□□□□□ -0.67
SCFD1-201ENST00000311943 MAMDC2Q7Z304 686 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-201ENST00000311943 RELL2Q8NC24 303 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-201ENST00000311943 RND1Q92730 232 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 CPPED1Q9BRF8 314 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-201ENST00000311943 PINK1Q9BXM7 581 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 PTGES2Q9H7Z7 377 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 NPDC1Q9NQX5 325 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-201ENST00000311943 KLHL14Q9P2G3 628 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 CLEC4AQ9UMR7 237 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 A0A0J9YW62 118 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 A0A1W2PNR3 127 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 AGAP5A6NIR3 686 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 DYNC1I1O14576 645 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 EIF1AYO14602 144 aaKnown RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 TNFSF11O14788 317 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 GCM2O75603 506 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 KRT16P08779 473 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 PRKCAP17252 672 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 POU3F2P20265 443 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 PTNP21246 168 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 BMP5P22003 454 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 HTR1EP28566 365 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 P2RX1P51575 399 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 KCNJ10P78508 379 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 NFYCQ13952 458 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 RUNDC3AQ59EK9 446 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 MRPL2Q5T653 305 aaKnown RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 PPP4R4Q6NUP7 873 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 ZNF836Q6ZNA1 936 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 DHDDSQ86SQ9 333 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 MTDHQ86UE4 582 aaKnown RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 PTOV1Q86YD1 416 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 FNDC9Q8TBE3 224 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 INTS12Q96CB8 462 aaKnown RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 DOCK7Q96N67 2140 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 SUCOQ9UBS9 1254 aaKnown RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 PCDHGB3Q9Y5G1 929 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 IGHV3-15A0A0B4J1V0 119 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 KRT75O95678 551 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 ACTL6AO96019 429 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 OPN1SWP03999 348 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 CPN1P15169 458 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 PSPHP78330 225 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 REP15Q6BDI9 236 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 SP5Q6BEB4 398 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 CA5BP1Q8WTZ4 195 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 TRNT1Q96Q11 434 aaKnown RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 DNAJB12Q9NXW2 375 aaKnown RBP10.84□□□□□ -0.67
SCFD1-201ENST00000311943 TRIM33Q9UPN9 1127 aa10.84□□□□□ -0.67
SCFD1-201ENST00000311943 DSPPQ9NZW4 1301 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 ANGPT2O15123 496 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 CXCL13O43927 109 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 WDR1O75083 606 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 EIF1AXP47813 144 aaKnown RBP10.83□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF41P51814 821 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-201ENST00000311943 SESN3P58005 492 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 PON3Q15166 354 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 LRRC74BQ6ZQY2 392 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 MSANTD1Q6ZTZ1 278 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 ADGRE4PQ86SQ3 457 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 LILRA2Q8N149 483 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF808Q8N4W9 903 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF527Q8NB42 609 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 OR52P1PQ8NH57 321 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 ROBO4Q8WZ75 1007 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 RCN3Q96D15 328 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 ANKRD27Q96NW4 1050 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 CGREF1Q99674 301 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 SRXN1Q9BYN0 137 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 P2RX2Q9UBL9 471 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 LEF1Q9UJU2 399 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-201ENST00000311943 PACSIN3Q9UKS6 424 aa10.83□□□□□ -0.68
SCFD1-201ENST00000311943 INTS1Q8N201 2190 aaKnown RBP10.83□□□□□ -0.68
SCFD1-201ENST00000311943 AHRRA9YTQ3 701 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 PGM3O95394 542 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 CLDN14O95500 239 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 IL7RP16871 459 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 GPX2P18283 190 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 RPS4Y1P22090 263 aaKnown RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 CHMP24386 653 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 CPA2P48052 419 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms