RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 M0R082 166 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 KPNA4O00629 521 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-201ENST00000309469 SCRG1O75711 98 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 DCAF7P61962 342 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 TIGD6Q17RP2 521 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 PWWP2BQ6NUJ5 590 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 SLC30A6Q6NXT4 461 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 TMPRSS11FQ6ZWK6 438 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 CDK20Q8IZL9 346 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 STT3BQ8TCJ2 826 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 OIT3Q8WWZ8 545 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 SAMD8Q96LT4 415 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 TEX12Q9BXU0 123 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 ATP13A2Q9NQ11 1180 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 UBQLN4Q9NRR5 601 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 TAS2R16Q9NYV7 291 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 TMEM5Q9Y2B1 443 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 SLC35A3Q9Y2D2 325 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 IGLV3-12A0A075B6K2 115 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 EFCAB7A8K855 629 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 CD36P16671 472 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 TGFBR2P37173 567 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 CTBP2P56545 445 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 SPCS2Q15005 226 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 NDUFAF6Q330K2 333 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 NKAIN1Q4KMZ8 207 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 ALG10BQ5I7T1 473 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 SLITRK4Q8IW52 837 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 BRIX1Q8TDN6 353 aaKnown RBP19.57■□□□□ 0.72
ATG4D-201ENST00000309469 BPIFA2Q96DR5 249 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 TMEM80Q96HE8 168 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 PHOX2BQ99453 314 aa19.57■□□□□ 0.72
ATG4D-201ENST00000309469 GTPBP2Q9BX10 602 aaKnown RBP19.57■□□□□ 0.72
ATG4D-201ENST00000309469 MEPEQ9NQ76 525 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-201ENST00000309469 MRTO4Q9UKD2 239 aaKnown RBP19.57■□□□□ 0.72
ATG4D-201ENST00000309469 TECTAO75443 2155 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 SYNDIG1LA6NDD5 238 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 SYPP08247 313 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 LIPAP38571 399 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 RBM34P42696 430 aaKnown RBP19.56■□□□□ 0.72
ATG4D-201ENST00000309469 EBPQ15125 230 aaKnown RBP19.56■□□□□ 0.72
ATG4D-201ENST00000309469 PGGHGQ32M88 737 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 ULK3Q6PHR2 472 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 SHISA6Q6ZSJ9 500 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 CYP4Z2PQ8N1L4 340 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 CADM2Q8N3J6 435 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 ZNF527Q8NB42 609 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 OR2T33Q8NG76 320 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 OR1N1Q8NGS0 311 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 WDR36Q8NI36 951 aaKnown RBP19.56■□□□□ 0.72
ATG4D-201ENST00000309469 GAL3ST4Q96RP7 486 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 ZNF426Q9BUY5 554 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 RPS6KB2Q9UBS0 482 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 COPS7AQ9UBW8 275 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 GPR52Q9Y2T5 361 aa19.56■□□□□ 0.72
ATG4D-201ENST00000309469 ZGLP1P0C6A0 271 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 FUT1P19526 365 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 ADH7P40394 386 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 PI4KAP42356 2102 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 DUSP3P51452 185 aaPredicted RBP19.55■□□□□ 0.72
ATG4D-201ENST00000309469 DCTN2Q13561 401 aaKnown RBP19.55■□□□□ 0.72
ATG4D-201ENST00000309469 CLPPQ16740 277 aaPredicted RBP19.55■□□□□ 0.72
ATG4D-201ENST00000309469 KIRREL2Q6UWL6 708 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 LANCL3Q6ZV70 420 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 C9orf40Q8IXQ3 194 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 GFM1Q96RP9 751 aaKnown RBP19.55■□□□□ 0.72
ATG4D-201ENST00000309469 IL20RAQ9UHF4 553 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 NUP210LQ5VU65 1888 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 SURF4O15260 269 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 UTS2O95399 124 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 CH25HO95992 272 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 HPGDP15428 266 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 CSTF2P33240 577 aaKnown RBP eCLIP19.55■□□□□ 0.72
ATG4D-201ENST00000309469 MLLT10P55197 1068 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 LPAL2Q16609 132 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 PHF19Q5T6S3 580 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 FNDC7Q5VTL7 733 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 HLA-DQA1Q5Y7H0 255 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 LINC00114Q6XXX2 140 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 PRR23CQ6ZRP0 262 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 ZNF367Q7RTV3 350 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 ZNF440Q8IYI8 595 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 TBC1D15Q8TC07 691 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 OR52D1Q9H346 318 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 UBQLN3Q9H347 655 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 HHATLQ9HCP6 504 aa19.55■□□□□ 0.72
ATG4D-201ENST00000309469 VCANP13611 3396 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 SCDO00767 359 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 SLC22A1O15245 554 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 PRODHO43272 600 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 RFPL3O75679 317 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 HMGN1P05114 100 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 FOXL2P58012 376 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 DCDP81605 110 aaKnown RBP19.54■□□□□ 0.72
ATG4D-201ENST00000309469 FAAH2Q6GMR7 532 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 HSDL2Q6YN16 418 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 BMP8AQ7Z5Y6 402 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 FAM71CQ8NEG0 241 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 ANKK1Q8NFD2 765 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 FANK1Q8TC84 345 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms