RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 AHSA2Q719I0 299 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SLC44A2Q8IWA5 706 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 STX19Q8N4C7 294 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CLDN19Q8N6F1 224 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 POC5Q8NA72 575 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 OR10G2Q8NGC3 310 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 OR6C4Q8NGE1 309 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 OR52N2Q8NGI0 321 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CLHC1Q8NHS4 586 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 WDR20Q8TBZ3 569 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF675Q8TD23 568 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 HCAR2Q8TDS4 363 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 GEMIN6Q8WXD5 167 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 RPL3LQ92901 407 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 TMEM159Q96B96 161 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 PYCR2Q96C36 320 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 REPS1Q96D71 796 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 WDR34Q96EX3 536 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 APIPQ96GX9 242 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 COQ10AQ96MF6 247 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 WDFY2Q96P53 400 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 AGAP4Q96P64 663 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 TRNT1Q96Q11 434 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SMIM14Q96QK8 99 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 TAAR9Q96RI9 348 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 FEVQ99581 238 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 BARD1Q99728 777 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CMKLR1Q99788 373 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SLX1AQ9BQ83 275 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 GPR87Q9BY21 358 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 ALOXE3Q9BYJ1 711 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 B3GNT4Q9C0J1 378 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 OR2B2Q9GZK3 357 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 HOXD1Q9GZZ0 328 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 DPEP2Q9H4A9 486 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF556Q9HAH1 456 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 APMAPQ9HDC9 416 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 EXD2Q9NVH0 621 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CLN6Q9NWW5 311 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 NDUFAF4Q9P032 175 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 TAAR2Q9P1P5 351 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SEC14L4Q9UDX3 406 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 NDOR1Q9UHB4 597 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 PCDHGB6Q9Y5F9 930 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 MRPS18BQ9Y676 258 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 NUP210LQ5VU65 1888 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 NAV3Q8IVL0 2385 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 MGAT4DA6NG13 374 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ZAR1LA6NP61 321 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PDZK1P1A8MUH7 402 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 hCG_2039718K7EN88 272 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 CCRL2O00421 344 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 DSCR3O14972 297 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ZW10O43264 779 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 SEC14L5O43304 696 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 RAD1O60671 282 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TBX19O60806 448 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PRAMEF4O60810 478 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PSIP1O75475 530 aaKnown RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 GCM2O75603 506 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 SLCO2B1O94956 709 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 KCNK2O95069 426 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 KRT75O95678 551 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 OXSR1O95747 527 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ADAP00813 363 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 CATP04040 527 aaKnown RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 KRT8P05787 483 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ANXA4P09525 319 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ADORA3P0DMS8 318 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PRKAR1AP10644 381 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 LAMP1P11279 417 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 CYP4B1P13584 511 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ATP1B2P14415 290 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 NAT1P18440 290 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 RHCEP18577 417 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 IDSP22304 550 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 CBLP22681 906 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 LHCGRP22888 699 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PTBP1P26599 531 aaKnown RBP eCLIP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 RRM2P31350 389 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TIA1P31483 386 aaKnown RBP eCLIP4.54□□□□□ -1.682e-18■■□□□ 13.7
CKS1B-201ENST00000308987 PTGS2P35354 604 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 CASP3P42574 277 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 XCR1P46094 333 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 MVDP53602 400 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 SMIM11AP58511 58 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 LSM3P62310 102 aaKnown RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 POLR2LP62875 67 aaKnown RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 IL1RL1Q01638 556 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 RIPPLY1Q0D2K3 151 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ST3GAL4Q11206 333 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 SQSTM1Q13501 440 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PDE7AQ13946 482 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 DGCR6Q14129 220 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 NCF4Q15080 339 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ELAVL1Q15717 326 aaKnown RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 SYT16Q17RD7 645 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 DEFB109BQ30KR1 87 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ARMCX4Q5H9R4 360 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 SLC25A30Q5SVS4 291 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms