RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 A0A0B4J2E0 115 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 A0A1B0GX12 115 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 SERINC4A6NH21 518 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 OR6C76A6NM76 312 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 C4orf47A7E2U8 309 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 CLCA1A8K7I4 914 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 TO15178 435 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 PIP5K1CO60331 668 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 ADAM11O75078 769 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 MT-ND2P03891 347 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 GP1BAP07359 652 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 LCN1P31025 176 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 GRK6P43250 576 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 GIPRP48546 466 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 DCDP81605 110 aaKnown RBP10.94□□□□□ -0.66
TRIM40-205ENST00000307859 OCA2Q04671 838 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 IL11RAQ14626 422 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 KLHL26Q53HC5 615 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 FNDC7Q5VTL7 733 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 CASP12Q6UXS9 341 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 B3GNT6Q6ZMB0 384 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF550Q7Z398 422 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 MRGPREQ86SM8 312 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 MEX3DQ86XN8 651 aaKnown RBP10.94□□□□□ -0.66
TRIM40-205ENST00000307859 CLVS1Q8IUQ0 354 aaPredicted RBP10.94□□□□□ -0.66
TRIM40-205ENST00000307859 C9orf40Q8IXQ3 194 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 CLDN22Q8N7P3 220 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 LSMEM1Q8N8F7 131 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 BMPERQ8N8U9 685 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 FAM71CQ8NEG0 241 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 OR8J1Q8NGP2 316 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 OR4C3Q8NH37 302 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 WDR36Q8NI36 951 aaKnown RBP10.94□□□□□ -0.66
TRIM40-205ENST00000307859 FAR1Q8WVX9 515 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 ISOC1Q96CN7 298 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 NMD3Q96D46 503 aaKnown RBP10.94□□□□□ -0.66
TRIM40-205ENST00000307859 CLIP3Q96DZ5 547 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 LMF1Q96S06 567 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 POLDIP3Q9BY77 421 aaKnown RBP10.94□□□□□ -0.66
TRIM40-205ENST00000307859 PLA2G12AQ9BZM1 189 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 TRIM2Q9C040 744 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 CCDC90BQ9GZT6 254 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 HOXD1Q9GZZ0 328 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 PCNX3Q9H6A9 2034 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 TMEM27Q9HBJ8 222 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 KRCC1Q9NPI7 259 aaPredicted RBP10.94□□□□□ -0.66
TRIM40-205ENST00000307859 CLN6Q9NWW5 311 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 OCIAD1Q9NX40 245 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 CNIH4Q9P003 139 aa10.94□□□□□ -0.66
TRIM40-205ENST00000307859 C2orf92A0A1B0GVN3 265 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 VSTM2BA6NLU5 285 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 KHNYNO15037 678 aaKnown RBP10.93□□□□□ -0.66
TRIM40-205ENST00000307859 CHP2O43745 196 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 CDK1P06493 297 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 PAX7P23759 505 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 ACP1P24666 158 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 ACVR2AP27037 513 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 SLC5A2P31639 672 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 ADH7P40394 386 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 STAT5AP42229 794 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 SMSP52788 366 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 EFNB1P98172 346 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 GINS1Q14691 196 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 SLC25A30Q5SVS4 291 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 TCEAL6Q6IPX3 200 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 LANCL3Q6ZV70 420 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 OVCH1Q7RTY7 1134 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF441Q8N8Z8 693 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 OR8D4Q8NGM9 314 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 TEX47Q8TBZ9 253 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 TMEM239Q8WW34 195 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 GGHQ92820 318 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 FGF11Q92914 225 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 TCEAL3Q969E4 200 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 MYDGFQ969H8 173 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 COPS4Q9BT78 406 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF426Q9BUY5 554 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 SLC26A1Q9H2B4 701 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 DSN1Q9H410 356 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 EGLN3Q9H6Z9 239 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 APMAPQ9HDC9 416 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 ACOT13Q9NPJ3 140 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 UBQLN4Q9NRR5 601 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 IL20Q9NYY1 176 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 CNOT2Q9NZN8 540 aaKnown RBP10.93□□□□□ -0.66
TRIM40-205ENST00000307859 FLRT3Q9NZU0 649 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 COPS7AQ9UBW8 275 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 MRTO4Q9UKD2 239 aaKnown RBP10.93□□□□□ -0.66
TRIM40-205ENST00000307859 SLC35A3Q9Y2D2 325 aa10.93□□□□□ -0.66
TRIM40-205ENST00000307859 A0A1B0GWA3 101 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 EFCAB7A8K855 629 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF99A8MXY4 864 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-205ENST00000307859 INMTO95050 263 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 LDOC1O95751 146 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-205ENST00000307859 CSTAP01040 98 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 CYC1P08574 325 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 PIPP12273 146 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-205ENST00000307859 CSTF2P33240 577 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRIM40-205ENST00000307859 SLC15A1P46059 708 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 GPR4P46093 362 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms