RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 CSTF1Q05048 431 aaKnown RBP15.22■□□□□ 0.03
TVP23B-201ENST00000307767 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.22■□□□□ 0.03
TVP23B-201ENST00000307767 NNATQ16517 81 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 NIPAL1Q6NVV3 410 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 SIRT6Q8N6T7 355 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 FAM83FQ8NEG4 500 aaPredicted RBP15.22■□□□□ 0.03
TVP23B-201ENST00000307767 FANK1Q8TC84 345 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 TMEM203Q969S6 136 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 DGAT2Q96PD7 388 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 LMF1Q96S06 567 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 DCLRE1CQ96SD1 692 aaKnown RBP15.22■□□□□ 0.03
TVP23B-201ENST00000307767 KCNS3Q9BQ31 491 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 JAM3Q9BX67 310 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 POLE4Q9NR33 117 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 ENAMQ9NRM1 1142 aa15.22■□□□□ 0.03
TVP23B-201ENST00000307767 BLACEA4D250 179 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 SNTNA6NMZ2 147 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 PIAS2O75928 621 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 SOX30O94993 753 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 CLEC2LP0C7M8 214 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 MYL12AP19105 171 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 RANBP1P43487 201 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 HSD17B7P56937 341 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 HNRNPKP61978 463 aaKnown RBP eCLIP15.21■□□□□ 0.03
TVP23B-201ENST00000307767 DNASE1L3Q13609 305 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 TRIM16LQ309B1 348 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 NDUFAF6Q330K2 333 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 PLK5Q496M5 336 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 VASNQ6EMK4 673 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 PLBD1Q6P4A8 553 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 CD200R1LQ6Q8B3 271 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 CXXC5Q7LFL8 322 aaKnown RBP15.21■□□□□ 0.03
TVP23B-201ENST00000307767 OR10A5Q9H207 317 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 SIAEQ9HAT2 523 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 ERVK13-1Q9NX77 482 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 FBXL21Q9UKT6 434 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 MRPS33Q9Y291 106 aaKnown RBP15.21■□□□□ 0.03
TVP23B-201ENST00000307767 PEX16Q9Y5Y5 336 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 PRAMEF2O60811 474 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 ZNF45Q02386 682 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 SLC35F1Q5T1Q4 408 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 STEAP3Q658P3 488 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 NIPAL3Q6P499 406 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 PLEKHG7Q6ZR37 379 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 ZNF554Q86TJ5 538 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 ZNF614Q8N883 585 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 BCORP1Q8N888 145 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 ZNF321PQ8N8H1 164 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 ZFP41Q8N8Y5 198 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 ADAMTS18Q8TE60 1221 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.21■□□□□ 0.03
TVP23B-201ENST00000307767 RFKQ969G6 155 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 PPP1R14BQ96C90 147 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 NEURL2Q9BR09 285 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 TMEM27Q9HBJ8 222 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 PDE7BQ9NP56 450 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 C14orf105Q9NVL8 296 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 SOHLH2Q9NX45 425 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 KLHL3Q9UH77 587 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 CAB39Q9Y376 341 aaPredicted RBP15.21■□□□□ 0.03
TVP23B-201ENST00000307767 MED31Q9Y3C7 131 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 MAU2Q9Y6X3 613 aa15.21■□□□□ 0.03
TVP23B-201ENST00000307767 LAMA1P25391 3075 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 TRAV27A0A087WT01 109 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 PNMA8CA0A1B0GUJ8 204 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 H0YIG0 161 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 CLDN4O14493 209 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 ATP12AP54707 1039 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 OR1D5P58170 312 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 FOXK2Q01167 660 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 ZNHIT3Q15649 155 aaPredicted RBP15.2■□□□□ 0.02
TVP23B-201ENST00000307767 TMEM44Q2T9K0 475 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 PRAMEF17Q5VTA0 474 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 KIRREL2Q6UWL6 708 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 LAPTM4BQ86VI4 370 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 SYT14Q8NB59 555 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 OR9Q1Q8NGQ5 310 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 PTPMT1Q8WUK0 201 aaPredicted RBP15.2■□□□□ 0.02
TVP23B-201ENST00000307767 TM9SF2Q99805 663 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 NUAK2Q9H093 628 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 FN3KQ9H479 309 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 EVA1AQ9H8M9 152 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 KRCC1Q9NPI7 259 aaPredicted RBP15.2■□□□□ 0.02
TVP23B-201ENST00000307767 SNTG1Q9NSN8 517 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 WNT16Q9UBV4 365 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 SSR3Q9UNL2 185 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 MRPS17Q9Y2R5 130 aaKnown RBP15.2■□□□□ 0.02
TVP23B-201ENST00000307767 UGT2A1Q9Y4X1 527 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 CCDC182A6NF36 153 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 TBX1O43435 398 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 GTF2E2P29084 291 aaKnown RBP15.2■□□□□ 0.02
TVP23B-201ENST00000307767 TNFSF8P32971 234 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 PGDP52209 483 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 FABP5Q01469 135 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 ZNF791Q3KP31 576 aaPredicted RBP15.2■□□□□ 0.02
TVP23B-201ENST00000307767 TCTE1Q5JU00 501 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 C22orf42Q6IC83 251 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 QSOX2Q6ZRP7 698 aa15.2■□□□□ 0.02
TVP23B-201ENST00000307767 MED25Q71SY5 747 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms