RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 SEMA4GQ9NTN9 838 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 GXYLT2A0PJZ3 443 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 PIP5K1CO60331 668 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 TP53P04637 393 aaPredicted RBP12.59□□□□□ -0.39
SEC23A-201ENST00000307712 DNASE1L1P49184 302 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 NNATQ16517 81 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 PCGF3Q3KNV8 242 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 ARMC10Q8N2F6 343 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 CPA6Q8N4T0 437 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 TMEM99Q8N816 258 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 DTD2Q96FN9 168 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 FCRL1Q96LA6 429 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 AMDHD1Q96NU7 426 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 LYSMD1Q96S90 227 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 PCDHB16Q9NRJ7 776 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 CKAP5Q14008 2032 aa12.58□□□□□ -0.39
SEC23A-201ENST00000307712 C13orf42A0A1B0GVH6 325 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ACOD1A6NK06 481 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 TMEM35AQ53FP2 167 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 HLA-DQA1Q5Y7H0 255 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 TCEAL8Q8IYN2 117 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 BEST3Q8N1M1 668 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 OR13C2Q8NGS9 318 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 SMAP2Q8WU79 429 aaPredicted RBP12.58□□□□□ -0.4
SEC23A-201ENST00000307712 BPIFA2Q96DR5 249 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 TRMT2BQ96GJ1 504 aaKnown RBP12.58□□□□□ -0.4
SEC23A-201ENST00000307712 LRIG1Q96JA1 1093 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 MSLNLQ96KJ4 702 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 MED18Q9BUE0 208 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 PELI2Q9HAT8 420 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 HCFC1R1Q9NWW0 138 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 OR1A2Q9Y585 309 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 MIA3Q5JRA6 1907 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 CDHR4A6H8M9 788 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ARRDC5A6NEK1 342 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 SLC25A12O75746 678 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 E2F1Q01094 437 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 RPL13AP3Q6NVV1 102 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 KCTD9Q7L273 389 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.58□□□□□ -0.4
SEC23A-201ENST00000307712 NRSN1Q8IZ57 195 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 CPXM2Q8N436 756 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 BRIX1Q8TDN6 353 aaKnown RBP12.58□□□□□ -0.4
SEC23A-201ENST00000307712 WFIKKN2Q8TEU8 576 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ISG20L2Q9H9L3 353 aaKnown RBP12.58□□□□□ -0.4
SEC23A-201ENST00000307712 POT1Q9NUX5 634 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 DPP7Q9UHL4 492 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ZNF250P15622 560 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 PTBP1P26599 531 aaKnown RBP eCLIP12.58□□□□□ -0.46e-7■■□□□ 12.3
SEC23A-201ENST00000307712 ACTR1BP42025 376 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ACTR1AP61163 376 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ACTA2P62736 377 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ACTG2P63267 376 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 GAS6Q14393 721 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 AMZ1Q400G9 498 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 C18orf63Q68DL7 685 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 GAREM2Q75VX8 874 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 DPPA4Q7L190 304 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 JAGN1Q8N5M9 183 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 THAP6Q8TBB0 222 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 LINC01599Q8WXQ3 324 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ARSGQ96EG1 525 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
SEC23A-201ENST00000307712 AIFM2Q9BRQ8 373 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 ABRACLQ9P1F3 81 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 SH2B3Q9UQQ2 575 aa12.58□□□□□ -0.4
SEC23A-201ENST00000307712 IGLON5A6NGN9 336 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 OR52A4PA6NMU1 304 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 FFAR1O14842 300 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 TGM5O43548 720 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 TMPRSS11DO60235 418 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 NFATC1O95644 943 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 LIMS3P0CW19 117 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 LIMS4P0CW20 117 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 NFYAP23511 347 aaPredicted RBP12.57□□□□□ -0.4
SEC23A-201ENST00000307712 ITGB7P26010 798 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 GNALP38405 381 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 ERVK-25P63136 954 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 HTR4Q13639 388 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 PUS10Q3MIT2 529 aaKnown RBP12.57□□□□□ -0.4
SEC23A-201ENST00000307712 FAM69AQ5T7M9 428 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 ERN2Q76MJ5 926 aaKnown RBP12.57□□□□□ -0.4
SEC23A-201ENST00000307712 GET4Q7L5D6 327 aaPredicted RBP12.57□□□□□ -0.4
SEC23A-201ENST00000307712 TMEM17Q86X19 198 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 SDR16C5Q8N3Y7 309 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 OR6N2Q8NGY6 317 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 UCN3Q969E3 161 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 SDHCQ99643 169 aaPredicted RBP12.57□□□□□ -0.4
SEC23A-201ENST00000307712 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 FLVCR2Q9UPI3 526 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 TRAV18A0A075B6X5 111 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 SIX6O95475 246 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 RAB28P51157 221 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 CRMP1Q14194 572 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 DUSP6Q16828 381 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 SLC7A5P2Q9GIP4 190 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 DPEP2Q9H4A9 486 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 SIDT1Q9NXL6 827 aaKnown RBP12.57□□□□□ -0.4
SEC23A-201ENST00000307712 EDDM13A0A1B0GTR0 161 aa12.57□□□□□ -0.4
SEC23A-201ENST00000307712 NAT1P18440 290 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms