RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 KCMF1Q9P0J7 381 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SLC7A7Q9UM01 511 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 A0A0U1RQF3 1178 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 MAN2B1O00754 1011 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 TK1P04183 234 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 TP53P04637 393 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 MMP2P08253 660 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 OSMP13725 252 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CD1DP15813 335 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 IL32P24001 234 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 FCER1GP30273 86 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 MRPS10P82664 201 aaKnown RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 MAP4K2Q12851 820 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 OR7A5Q15622 319 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SERINC5Q86VE9 423 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SLC5A8Q8N695 610 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 HUS1BQ8NHY5 278 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SLC19A3Q9BZV2 496 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SPHK2Q9NRA0 654 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 EBF1Q9UH73 591 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 PCDHGA1Q9Y5H4 931 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 F6UZH7 168 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 AP1G1O43747 822 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 SDC3O75056 442 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 RDH16O75452 317 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 GDF1P27539 372 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 TACR3P29371 465 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 CD6P30203 668 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 ETV4P43268 484 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 BAXQ07812 192 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 HNF4GQ14541 408 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 NPY5RQ15761 445 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 PIGCQ92535 297 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 BIRC8Q96P09 236 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 CPNE7Q9UBL6 633 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 CA14Q9ULX7 337 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 RGPD1P0DJD0 1748 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 KLHL33A6NCF5 533 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 IGLON5A6NGN9 336 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 HIDE1A8MVS5 230 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 NFKBIEO00221 500 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 GAPDHSO14556 408 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-201ENST00000302528 MAGEB4O15481 346 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-201ENST00000302528 ARHGEF15O94989 841 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 GSRP00390 522 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 FAM163BP0C2L3 166 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 F2RP25116 425 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 WNT4P56705 351 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 TMEM244Q5VVB8 128 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 TXNRD3NBQ6F5E7 133 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 CPOQ8IVL8 374 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 C15orf54Q8N8G6 183 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 KDM1BQ8NB78 822 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 CLEC1AQ8NC01 280 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 STEAP2Q8NFT2 490 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 STEAP1Q9UHE8 339 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 GLTPD2A6NH11 291 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 ABOP16442 354 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 HLA-DMAP28067 261 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 SPOCK1Q08629 439 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 SCAPQ12770 1279 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 SHEQ5VZ18 495 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 METAP1DQ6UB28 335 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-201ENST00000302528 IL34Q6ZMJ4 242 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 SVBPQ8N300 66 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 OR13J1Q8NGT2 312 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 MUCL1Q96DR8 90 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 EGLN3Q9H6Z9 239 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 THSD1Q9NS62 852 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 AIG1Q9NVV5 245 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 SLC2A8Q9NY64 477 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 EHFQ9NZC4 300 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 MYOTQ9UBF9 498 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 SOCS6O14544 535 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 DEFB110Q30KQ9 67 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 KHDC1LQ5JSQ8 128 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 PHYHD1Q5SRE7 291 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 OR4A16Q8NH70 328 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 NANPQ8TBE9 248 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 NGBQ9NPG2 151 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 ZDHHC7Q9NXF8 308 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 OR6C2Q9NZP2 312 aa9.79□□□□□ -0.84
CLIP1-201ENST00000302528 K7EQM0 130 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SLC31A2O15432 143 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PTAFRP25105 342 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SERTAD2Q14140 314 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 GK3PQ14409 553 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF74Q16587 644 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF836Q6ZNA1 936 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PRSS48Q7RTY5 328 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 NOXA1Q86UR1 476 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PRR22Q8IZ63 422 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PLD6Q8N2A8 252 aaKnown RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 KDM8Q8N371 416 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 ACOT11Q8WXI4 607 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 FOXJ1Q92949 421 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 BTF3L4Q96K17 158 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 HERPUD2Q9BSE4 406 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 THAP7Q9BT49 309 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 RNF39Q9H2S5 420 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms