RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 HOXD1Q9GZZ0 328 aa10.1□□□□□ -0.79
CLCC1-201ENST00000302500 PTGES2Q9H7Z7 377 aa10.1□□□□□ -0.79
CLCC1-201ENST00000302500 CRIM1Q9NZV1 1036 aa10.1□□□□□ -0.79
CLCC1-201ENST00000302500 VDAC3Q9Y277 283 aa10.1□□□□□ -0.79
CLCC1-201ENST00000302500 SERINC4A6NH21 518 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 CCDC154A6NI56 674 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 DUXAA6NLW8 204 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 DVL2O14641 736 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 SIAH2O43255 324 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 TGDSO95455 350 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 AK1P00568 194 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 IL2RAP01589 272 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 OR12D1P0DN82 309 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 BMP2P12643 396 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 POU3F2P20265 443 aaPredicted RBP10.09□□□□□ -0.79
CLCC1-201ENST00000302500 ELK4P28324 431 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 P2RX1P51575 399 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 NME5P56597 212 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 RAC1P63000 192 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 FOXF1Q12946 379 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 SNTB1Q13884 538 aaKnown RBP10.09□□□□□ -0.79
CLCC1-201ENST00000302500 SF3B4Q15427 424 aaKnown RBP eCLIP10.09□□□□□ -0.798e-7■■■□□ 18.1
CLCC1-201ENST00000302500 GSTA3Q16772 222 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 GTDC1Q4AE62 458 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 FLYWCH1Q4VC44 716 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 TNFAIP8L2Q6P589 184 aaPredicted RBP10.09□□□□□ -0.79
CLCC1-201ENST00000302500 MSANTD1Q6ZTZ1 278 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 TOR1AIP2Q8NFQ8 470 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 B4GALNT2Q8NHY0 566 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 CKAP2Q8WWK9 683 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 GTF2H4Q92759 462 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 INTS12Q96CB8 462 aaKnown RBP10.09□□□□□ -0.79
CLCC1-201ENST00000302500 SLC35G5Q96KT7 338 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 SLC35A5Q9BS91 424 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 PAIP1Q9H074 479 aaKnown RBP10.09□□□□□ -0.79
CLCC1-201ENST00000302500 POLE3Q9NRF9 147 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 NKIRAS1Q9NYS0 192 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 SLC25A37Q9NYZ2 338 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 MKLN1Q9UL63 735 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 FAF1Q9UNN5 650 aaPredicted RBP10.09□□□□□ -0.79
CLCC1-201ENST00000302500 CARD8Q9Y2G2 431 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 MTORP42345 2549 aa10.09□□□□□ -0.79
CLCC1-201ENST00000302500 CLDN24A6NM45 220 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 HMGB1P1B2RPK0 211 aaPredicted RBP10.08□□□□□ -0.8
CLCC1-201ENST00000302500 H3BML4 177 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 SCDO00767 359 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 EIF4E2O60573 245 aaKnown RBP10.08□□□□□ -0.8
CLCC1-201ENST00000302500 SS18L1O75177 396 aaPredicted RBP10.08□□□□□ -0.8
CLCC1-201ENST00000302500 STX11O75558 287 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 KLK2P20151 261 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 LOXP28300 417 aaPredicted RBP10.08□□□□□ -0.8
CLCC1-201ENST00000302500 S100A3P33764 101 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 SOAT1P35610 550 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 TLE4Q04727 773 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 CHRNEQ04844 493 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 DAZAP2Q15038 168 aaPredicted RBP10.08□□□□□ -0.8
CLCC1-201ENST00000302500 SYPL1Q16563 259 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 LRIF1Q5T3J3 769 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 BHLHB9Q6PI77 547 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 BTLAQ7Z6A9 289 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 RNF130Q86XS8 419 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 UBQLNLQ8IYU4 475 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 ANKFN1Q8N957 763 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 OR10D3Q8NH80 312 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 ROPN1LQ96C74 230 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 SH3YL1Q96HL8 342 aaPredicted RBP10.08□□□□□ -0.8
CLCC1-201ENST00000302500 OR52E6Q96RD3 313 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 SRXN1Q9BYN0 137 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 LAT2Q9GZY6 243 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 QRSL1Q9H0R6 528 aaKnown RBP10.08□□□□□ -0.8
CLCC1-201ENST00000302500 GALNT8Q9NY28 637 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 SLAMF8Q9P0V8 285 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 FOXD3Q9UJU5 478 aaPredicted RBP10.08□□□□□ -0.8
CLCC1-201ENST00000302500 ROS1P08922 2347 aa10.08□□□□□ -0.8
CLCC1-201ENST00000302500 AGAP5A6NIR3 686 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 SLC22A20A6NK97 555 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 MSTNO14793 375 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 CFLARO15519 480 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 ZNF264O43296 627 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 GMFGO60234 142 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 SLC22A3O75751 556 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 H6PDO95479 791 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 CPSF4O95639 269 aaKnown RBP10.07□□□□□ -0.8
CLCC1-201ENST00000302500 IL6P05231 212 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 GSNP06396 782 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 TFPTP0C1Z6 253 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 CD8BP10966 210 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 CAPN3P20807 821 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 MAGEA8P43361 318 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 CLK3P49761 638 aaKnown RBP10.07□□□□□ -0.8
CLCC1-201ENST00000302500 PPP2R2AP63151 447 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 LRRC74AQ0VAA2 488 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 PON3Q15166 354 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 ZNF239Q16600 458 aaKnown RBP10.07□□□□□ -0.8
CLCC1-201ENST00000302500 SPDYE7PQ495Y7 208 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 CGB2Q6NT52 195 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 BLOC1S3Q6QNY0 202 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 ESPNLQ6ZVH7 1005 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 HDXQ7Z353 690 aa10.07□□□□□ -0.8
CLCC1-201ENST00000302500 ZNF619Q8N2I2 560 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms