RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OR1Q1Q15612 314 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 DCST2Q5T1A1 773 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 FAM27D1Q5T7N8 215 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 TMEM91Q6ZNR0 172 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 NR2C2APQ86WQ0 139 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 TCTE3Q8IZS6 198 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 Q8N402 240 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 ZNF614Q8N883 585 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 OR4M1Q8NGD0 313 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 OR13C2Q8NGS9 318 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 FANK1Q8TC84 345 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 NT5CQ8TCD5 201 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 GRHL3Q8TE85 626 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 NR4A3Q92570 626 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SNAPC3Q92966 411 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SERINC2Q96SA4 455 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 RNF32Q9H0A6 362 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 OR51V1Q9H2C8 321 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SIDT1Q9NXL6 827 aaKnown RBP11.97□□□□□ -0.49
HIF3A-204ENST00000300862 GXYLT2A0PJZ3 443 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 H0YGG7 62 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 EGFP01133 1207 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 IGHA1P01876 353 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 HLA-DPB1P04440 258 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 CT62P0C5K7 136 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SLC2A2P11168 524 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-204ENST00000300862 TLX1P31314 330 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-204ENST00000300862 CTBP2P56545 445 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 ARF3P61204 181 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SHC2P98077 582 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 ELMOD2Q8IZ81 293 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SLC38A6Q8IZM9 456 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 COX18Q8N8Q8 333 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 CYB561A3Q8NBI2 242 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 OR10H4Q8NGA5 316 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 OR5H6Q8NGV6 325 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 OR51A7Q8NH64 312 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 FAM3CQ92520 227 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SIPA1Q96FS4 1042 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 PPIL3Q9H2H8 161 aaKnown RBP11.97□□□□□ -0.49
HIF3A-204ENST00000300862 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 ACTR10Q9NZ32 417 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 PTGFRNQ9P2B2 879 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 PHF11Q9UIL8 331 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 FBXL4Q9UKA2 621 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 EXOGQ9Y2C4 368 aaKnown RBP11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SLC22A7Q9Y694 548 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 CLCA3PQ9Y6N3 262 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 ATG2AQ2TAZ0 1938 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 TRAV27A0A087WT01 109 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 TRAPPC13A5PLN9 417 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 E9PI62 339 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 SMIM10L1P0DMW3 83 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 LAMP2P13473 410 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 RPS7P62081 194 aaKnown RBP11.96□□□□□ -0.49
HIF3A-204ENST00000300862 PPP1CAP62136 330 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 DUSP8Q13202 625 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 ZNF542PQ5EBM4 170 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 SDE2Q6IQ49 451 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 KIAA1324Q6UXG2 1013 aaKnown RBP11.96□□□□□ -0.49
HIF3A-204ENST00000300862 IL20RBQ6UXL0 311 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 RANBP3LQ86VV4 465 aaPredicted RBP11.96□□□□□ -0.49
HIF3A-204ENST00000300862 LIX1LQ8IVB5 337 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 TMEM239Q8WW34 195 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 TM4SF19Q96DZ7 209 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 SMIM10Q96HG1 83 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 TIMP4Q99727 224 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 RBCK1Q9BYM8 510 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 TTTY10Q9BZA0 68 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.49
HIF3A-204ENST00000300862 PPP1R3EQ9H7J1 279 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 EVA1BQ9NVM1 165 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 CLDND1Q9NY35 253 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 NTMQ9P121 344 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 USP36Q9P275 1121 aaKnown RBP11.96□□□□□ -0.49
HIF3A-204ENST00000300862 BRWD1Q9NSI6 2320 aa11.96□□□□□ -0.49
HIF3A-204ENST00000300862 ZSCAN5BA6NJL1 495 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 AKR7A2O43488 359 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 HCRTR1O43613 425 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 STX11O75558 287 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 HMGN1P05114 100 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 GYPBP06028 91 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 CTSBP07858 339 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 SAGP10523 405 aaPredicted RBP11.96□□□□□ -0.5
HIF3A-204ENST00000300862 PSKH1P11801 424 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 PAICSP22234 425 aaKnown RBP11.96□□□□□ -0.5
HIF3A-204ENST00000300862 NOS3P29474 1203 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 ERP29P30040 261 aaKnown RBP11.96□□□□□ -0.5
HIF3A-204ENST00000300862 GABRA3P34903 492 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 GZMKP49863 264 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 PPP3R1P63098 170 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 NFATC4Q14934 902 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 USP53Q70EK8 1073 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 ZNF619Q8N2I2 560 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 ENKURQ8TC29 256 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 WDR92Q96MX6 357 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 CD180Q99467 661 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 ALG8Q9BVK2 526 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 ZNF350Q9GZX5 532 aa11.96□□□□□ -0.5
HIF3A-204ENST00000300862 PIGUQ9H490 435 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms