RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 MARVELD2Q8N4S9 558 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 FAM110BQ8TC76 370 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 RND1Q92730 232 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 NINJ1Q92982 152 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 TAMM41Q96BW9 452 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 SENP5Q96HI0 755 aaPredicted RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 YIPF4Q9BSR8 244 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 BDH2Q9BUT1 245 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 EVA1AQ9H8M9 152 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 Q9N2J8 555 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 PPIEQ9UNP9 301 aaKnown RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 V9GYQ6 96 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 FLNAP21333 2647 aaKnown RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 MYOCOSA0A1B0GUC4 107 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 OR2W5A6NFC9 320 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 A8MVJ9 347 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 STX11O75558 287 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 MFN2O95140 757 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 SEMG1P04279 462 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 ITGA2P17301 1181 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 AQP1P29972 269 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 SSTR4P31391 388 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 CYB561P49447 251 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 SYPL1Q16563 259 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 CMPK2Q5EBM0 449 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 SLC44A2Q8IWA5 706 aaPredicted RBP19.22■□□□□ 0.67
SMCO4-201ENST00000298966 C17orf47Q8NEP4 570 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 SLC2A12Q8TD20 617 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 GPR151Q8TDV0 419 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 GEMIN6Q8WXD5 167 aaKnown RBP19.22■□□□□ 0.67
SMCO4-201ENST00000298966 CDS1Q92903 461 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 HSH2DQ96JZ2 352 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 BTBD9Q96Q07 612 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF184Q99676 751 aaPredicted RBP19.22■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF350Q9GZX5 532 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 SAP130Q9H0E3 1048 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 TP63Q9H3D4 680 aaPredicted RBP19.22■□□□□ 0.67
SMCO4-201ENST00000298966 MTHFD2LQ9H903 347 aaPredicted RBP19.22■□□□□ 0.67
SMCO4-201ENST00000298966 ANKRA2Q9H9E1 313 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 IL1RAPQ9NPH3 570 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 IFT52Q9Y366 437 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 DTNAQ9Y4J8 743 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 FBN3Q75N90 2809 aa19.22■□□□□ 0.67
SMCO4-201ENST00000298966 PHF3Q92576 2039 aaKnown RBP19.22■□□□□ 0.67
SMCO4-201ENST00000298966 DNAJC13O75165 2243 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 PRAMEF27A3QJZ7 478 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 SAGE2PA6NJ88 616 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 CLOCKO15516 846 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 TPST1O60507 370 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 CDC40O60508 579 aaKnown RBP eCLIP19.21■□□□□ 0.67
SMCO4-201ENST00000298966 PRSS23O95084 383 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 H6PDO95479 791 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 LCN1P31025 176 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 CRYBA2P53672 197 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 SLC37A1P57057 533 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 FUT5Q11128 374 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 DUSP8Q13202 625 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 GK3PQ14409 553 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 ZSWIM7Q19AV6 140 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 GRAMD1BQ3KR37 738 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 DCST2Q5T1A1 773 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF468Q5VIY5 522 aaPredicted RBP19.21■□□□□ 0.67
SMCO4-201ENST00000298966 IZUMO2Q6UXV1 221 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 AMIGO2Q86SJ2 522 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 C16orf52Q8NHV5 167 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF721Q8TF20 911 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 DNAJC9Q8WXX5 260 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 SDF2Q99470 211 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 G6PC3Q9BUM1 346 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 VCXQ9H320 206 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 DNAJB9Q9UBS3 223 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 MRTO4Q9UKD2 239 aaKnown RBP19.21■□□□□ 0.67
SMCO4-201ENST00000298966 WDR45Q9Y484 360 aa19.21■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF469Q96JG9 3925 aaPredicted RBP19.2■□□□□ 0.66
SMCO4-201ENST00000298966 TMEM200CA6NKL6 621 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 H0YJX3 145 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 SYT5O00445 386 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 FABP3P05413 133 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 THBS1P07996 1170 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 CHRM4P08173 479 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 GABRA3P34903 492 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 PPICP45877 212 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 MEOX1P50221 254 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 SLC26A5P58743 744 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 PSG6Q00889 435 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 CYP27C1Q4G0S4 372 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 SLC29A4Q7RTT9 530 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 ZNF619Q8N2I2 560 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 PACRGLQ8N7B6 248 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 SPPL2AQ8TCT8 520 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 PROX1Q92786 737 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 EME1Q96AY2 570 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 TPD52L3Q96J77 140 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 COL21A1Q96P44 957 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 ZNF347Q96SE7 839 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 PINK1Q9BXM7 581 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 OR8D2Q9GZM6 311 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 SLC38A1Q9H2H9 487 aa19.2■□□□□ 0.66
SMCO4-201ENST00000298966 DNAJB12Q9NXW2 375 aaKnown RBP19.2■□□□□ 0.66
SMCO4-201ENST00000298966 ZNF232Q9UNY5 417 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms