RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZNF480Q8WV37 535 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 NXPE2Q96DL1 559 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 SRA1Q9HD15 236 aaKnown RBP12.6□□□□□ -0.39
HPS3-201ENST00000296051 CACNA1EQ15878 2313 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 DISC1C4P0D8 188 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 RNASET2O00584 256 aaKnown RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 ARPC1BO15143 372 aaKnown RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 RGS9O75916 674 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 FARS2O95363 451 aaKnown RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 IL1AP01583 271 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 NUDT1P36639 197 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 MAP3K8P41279 467 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 SMAD4Q13485 552 aaKnown RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 TCEAL6Q6IPX3 200 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 CCSAPQ6IQ19 270 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 ZMYND19Q96E35 227 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 TSNAXQ99598 290 aaKnown RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 SLC25A18Q9H1K4 315 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 MYEF2Q9P2K5 600 aaKnown RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 HSD11B1P28845 292 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 FXYD6P3P58550 94 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 KLHL26Q53HC5 615 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 TSSK4Q6SA08 328 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 ALKAL2Q6UX46 152 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 UNC5DQ6UXZ4 953 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 MFSD4AQ8N468 514 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 LINC01465Q8N7H1 131 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 SLC38A5Q8WUX1 472 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 TANKQ92844 425 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 CDCP1Q9H5V8 836 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 METTL17Q9H7H0 456 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 TAAR2Q9P1P5 351 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 SPTAN1Q13813 2472 aaKnown RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 NPIPA5A0A0B4J1W7 369 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 C1orf226A1L170 272 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 NPIPA7E9PJI5 369 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 CREBL2O60519 120 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 RAD1O60671 282 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 MAS1P04201 325 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 SCG5P05408 212 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 NPIPA8P0DM63 369 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 F3P13726 295 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 RRAS2P62070 204 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 GALEQ14376 348 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 MANEALQ5VSG8 457 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 DPPA4Q7L190 304 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 TMEM151BQ8IW70 566 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 ZNF100Q8IYN0 542 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 LRRC25Q8N386 305 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 MNTQ99583 582 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 DOK1Q99704 481 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 ALOXE3Q9BYJ1 711 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 TMEM184CQ9NVA4 438 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 ENTPD2Q9Y5L3 495 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 ZNF670-ZNF695F2Z2N8 137 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 F5H0A9 414 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 HOXC11O43248 304 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 RDH16O75452 317 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 RBBP9O75884 186 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 DDCP20711 480 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 NFATC4Q14934 902 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 HAGHLQ6PII5 290 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 RSPO2Q6UXX9 243 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 IQCF2Q8IXL9 164 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 TREX2Q9BQ50 279 aaPredicted RBP12.59□□□□□ -0.39
HPS3-201ENST00000296051 EPHA6Q9UF33 1036 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 OSGIN1Q9UJX0 560 aa12.59□□□□□ -0.39
HPS3-201ENST00000296051 RNF13O43567 381 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 PSMB10P40306 273 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 PTH2RP49190 550 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 ARSJQ5FYB0 599 aaPredicted RBP12.58□□□□□ -0.4
HPS3-201ENST00000296051 TMPPEQ6ZT21 453 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 OR52E1Q8NGJ3 308 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 OR52E2Q8NGJ4 325 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 OR14L1PQ8NHC6 308 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 LHX3Q9UBR4 397 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 TMPRSS11EQ9UL52 423 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 H7C0S8 307 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 GABRPO00591 440 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 HTR1AP08908 422 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 RPS5P46782 204 aaKnown RBP12.58□□□□□ -0.4
HPS3-201ENST00000296051 DNM1P34Q6PK57 102 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 CYHR1Q6ZMK1 362 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 TM9SF4Q92544 642 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 PNPLA2Q96AD5 504 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 DMRT3Q9NQL9 472 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 SH2B3Q9UQQ2 575 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 ARAP2Q8WZ64 1704 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 NPIPA2E9PIF3 369 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 NPIPA3F8WFD2 350 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 PDGFAP04085 211 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 SHC1P29353 583 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 XCR1P46094 333 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 NR0B1P51843 470 aaKnown RBP12.58□□□□□ -0.4
HPS3-201ENST00000296051 CAPZA1P52907 286 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 GAS6Q14393 721 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 KIAA1211LQ6NV74 962 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms