RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 GPC6Q9Y625 555 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 TEX51A0A1B0GUA7 166 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 DCDC2BA2VCK2 349 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 BLOC1S5-TXNDC5H3BN57 136 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 IFNGP01579 166 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SEMG1P04279 462 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 OR12D1P0DN82 309 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SSTR4P31391 388 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 PIGAP37287 484 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 CCL11P51671 97 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 PSG6Q00889 435 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 FUT5Q11128 374 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SNAPC1Q16533 368 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 H3F3CQ6NXT2 135 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 TMEM81Q6P7N7 255 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 DHRS4L2Q6PKH6 230 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC34A3Q8N130 599 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 OR11G2Q8NGC1 345 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC38A5Q8WUX1 472 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 PYDC1Q8WXC3 89 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 POLR2J2Q9GZM3 115 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 POLR2J3Q9H1A7 115 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 AKIRIN1Q9H9L7 192 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 CHMP1AQ9HD42 196 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 DCAF13Q9NV06 445 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 CBLCQ9ULV8 474 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 IFT52Q9Y366 437 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SCN3AQ9NY46 2000 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 DOCK7Q96N67 2140 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 C2orf92A0A1B0GVN3 265 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 FKBP6O75344 327 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 CREG1O75629 220 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SYNGR4O95473 234 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 FCER2P06734 321 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 NUP62P37198 522 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 NR0B1P51843 470 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SOX8P57073 446 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 RNF4P78317 190 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 RPP38P78345 283 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 ELF3P78545 371 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 HSF2Q03933 536 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 CLEC12AQ5QGZ9 265 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 GLYATQ6IB77 296 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 KIRREL2Q6UWL6 708 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 MRGPREQ86SM8 312 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 CMIPQ8IY22 773 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF100Q8IYN0 542 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF619Q8N2I2 560 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 C10orf111Q8N326 155 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 PAPD5Q8NDF8 572 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 NFKBIDQ8NI38 313 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 THAP4Q8WY91 577 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 TMEM19Q96HH6 336 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 TSC22D3Q99576 134 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF223Q9UK11 482 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 KLK13Q9UKR3 277 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SH3PXD2BA1X283 911 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ZFAND5O76080 213 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 CST1P01037 141 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 THBS1P07996 1170 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ENDOUP21128 410 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 EFR3AQ14156 821 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 DUSP5Q16690 384 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 RNF220Q5VTB9 566 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 NPSR1Q6W5P4 371 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 CBLL1Q75N03 491 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 PEG10Q86TG7 708 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 SNX33Q8WV41 574 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 NR4A3Q92570 626 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 CDS1Q92903 461 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 C16orf58Q96GQ5 468 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 COQ7Q99807 217 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 TMEM121BQ9BXQ6 578 aaPredicted RBP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ITPAQ9BY32 194 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 FAM192AQ9GZU8 254 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 MRPL39Q9NYK5 338 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 EXPH5Q8NEV8 1989 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 DNAH14Q0VDD8 3507 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ZFYVE26Q68DK2 2539 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 SH3D21A4FU49 640 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 A8MVJ9 347 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 C11orf98E9PRG8 122 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF208O43345 1280 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 CT45A8P0DMV1 189 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 CT45A9P0DMV2 189 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 LIFP15018 202 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 CLN3Q13286 438 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 DECR1Q16698 335 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 NDUFAF6Q330K2 333 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 CT45A2Q5DJT8 189 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 GALNT5Q7Z7M9 940 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 TSEN15Q8WW01 171 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 GTPBP3Q969Y2 492 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 FRMD6Q96NE9 622 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 TBX5Q99593 518 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 DCUN1D5Q9BTE7 237 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 MTHFD2LQ9H903 347 aaPredicted RBP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ABCG2Q9UNQ0 655 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms