RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 GGNQ86UU5 652 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 RNF130Q86XS8 419 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 MISPQ8IVT2 679 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 GTPBP8Q8N3Z3 284 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 DPP10Q8N608 796 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 GOLGA6L1Q8N7Z2 621 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 GPR119Q8TDV5 335 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 NANOS1Q8WY41 292 aaKnown RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 ROPN1LQ96C74 230 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 TRNT1Q96Q11 434 aaKnown RBP8.27□□□□□ -1.09
HMGN1-201ENST00000288344 PANX1Q96RD7 426 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 TUBA1CQ9BQE3 449 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 SIKE1Q9BRV8 207 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 SLC35A5Q9BS91 424 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 IKZF5Q9H5V7 419 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 LDAHQ9H6V9 325 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 CALHM2Q9HA72 323 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 TPT1P8Q9HAU6 139 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 POLE3Q9NRF9 147 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 SDHAF3Q9NRP4 125 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 JKAMPQ9P055 326 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 CLCF1Q9UBD9 225 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 SH3BGRL2Q9UJC5 107 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 ACAD8Q9UKU7 415 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 PCDHGB4Q9UN71 923 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 DTNAQ9Y4J8 743 aa8.27□□□□□ -1.09
HMGN1-201ENST00000288344 A0A096LPI6 279 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 A0A1W2PP18 115 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 SERINC4A6NH21 518 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 AGAP5A6NIR3 686 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 LINC01387J3KSC0 135 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 RFXANKO14593 260 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 ADAMDEC1O15204 470 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 POLR3GO15318 223 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-201ENST00000288344 STX11O75558 287 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 CLDN14O95500 239 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 AK1P00568 194 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 GPX2P18283 190 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 IL11P20809 199 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF136P52737 540 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 CASP6P55212 293 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 CLDN20P56880 219 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 SKP2Q13309 424 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 FGFBP1Q14512 234 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 ADRM1Q16186 407 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 SYPL1Q16563 259 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 TIGD2Q4W5G0 525 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 SP5Q6BEB4 398 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-201ENST00000288344 TNFAIP8L2Q6P589 184 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-201ENST00000288344 B3GNT6Q6ZMB0 384 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 LRRC74BQ6ZQY2 392 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF621Q6ZSS3 439 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 ACAD11Q709F0 780 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 CCDC71Q8IV32 467 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-201ENST00000288344 ANKFN1Q8N957 763 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 TNIP2Q8NFZ5 429 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 TSPEARQ8WU66 669 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 SLC38A5Q8WUX1 472 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 XAGE5Q8WWM1 108 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 RND1Q92730 232 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 PMM1Q92871 262 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 SPDL1Q96EA4 605 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 THOC1Q96FV9 657 aaKnown RBP8.26□□□□□ -1.09
HMGN1-201ENST00000288344 AURKBQ96GD4 344 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-201ENST00000288344 ITCHQ96J02 903 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 SLC35G5Q96KT7 338 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 TBL1XR1Q9BZK7 514 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 LAT2Q9GZY6 243 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 MED17Q9NVC6 651 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 FAM53CQ9NYF3 392 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 VAPAQ9P0L0 249 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 PPP4R1LQ9P1A2 415 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 MKLN1Q9UL63 735 aa8.26□□□□□ -1.09
HMGN1-201ENST00000288344 ANKHD1Q8IWZ3 2542 aaKnown RBP8.25□□□□□ -1.09
HMGN1-201ENST00000288344 A0A087WZY1 265 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 C15orf38-AP3S2A0A0A6YYH1 394 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 A1L4Q6 167 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 CLDN24A6NM45 220 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 SHISA8B8ZZ34 492 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 FBP2O00757 339 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 EIF4E2O60573 245 aaKnown RBP8.25□□□□□ -1.09
HMGN1-201ENST00000288344 GCM2O75603 506 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-201ENST00000288344 RCBTB2O95199 551 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 H6PDO95479 791 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 TGM6O95932 706 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 AGR2O95994 175 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 ESRRAP11474 423 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-201ENST00000288344 ETFAP13804 333 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF17P17021 662 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 HK1P19367 917 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 ADH6P28332 368 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 RFX3P48380 749 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 GZMMP51124 257 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 P2RX1P51575 399 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 SMSP52788 366 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 SQLEQ14534 574 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 RGNQ15493 299 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 NDUFAF6Q330K2 333 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 FBXL19-AS1Q494R0 122 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 SPDYE7PQ495Y7 208 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms