RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 NPTNQ9Y639 398 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 WNT6Q9Y6F9 365 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 IGKV1-8A0A0C4DH67 115 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 H7BY64 318 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 OR1F1O43749 312 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 AGR2O95994 175 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 HMGN2P05204 90 aaKnown RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 RHOP08100 348 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 NPR2P20594 1047 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 TRIM23P36406 574 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 SSR2P43308 183 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CRYZQ08257 329 aaKnown RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 ST3GAL2Q16842 350 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 GSG1Q2KHT4 349 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 ZNF311Q5JNZ3 666 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 NHLRC3Q5JS37 347 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 SLC48A1Q6P1K1 146 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CFAP77Q6ZQR2 320 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 LINC00518Q8N0U6 118 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 FTMTQ8N4E7 242 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 LINC01555Q8NAE3 123 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 OR2L8Q8NGY9 312 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 PRAP1Q96NZ9 151 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 OR7D2Q96RA2 312 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 ACTR6Q9GZN1 396 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 LDAHQ9H6V9 325 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 KRCC1Q9NPI7 259 aaPredicted RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 EMC3Q9P0I2 261 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 SLC23A2Q9UGH3 650 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 FEZF1A0PJY2 475 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 PRR19A6NJB7 356 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 SSNA1O43805 119 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 LCMT2O60294 686 aaKnown RBP9.65□□□□□ -0.86
SKA1-201ENST00000285116 ADH1CP00326 375 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 TIMP1P01033 207 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 EIF4EP06730 217 aaKnown RBP9.65□□□□□ -0.86
SKA1-201ENST00000285116 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
SKA1-201ENST00000285116 H2AFB2P0C5Z0 115 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 F3P13726 295 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 HIST1H1TP22492 207 aaPredicted RBP9.65□□□□□ -0.86
SKA1-201ENST00000285116 BUD31P41223 144 aaPredicted RBP9.65□□□□□ -0.86
SKA1-201ENST00000285116 METAP1P53582 386 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 VSX2P58304 361 aaPredicted RBP9.65□□□□□ -0.86
SKA1-201ENST00000285116 B2MP61769 119 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 LSM11P83369 360 aaKnown RBP eCLIP9.65□□□□□ -0.86
SKA1-201ENST00000285116 RPL6Q02878 288 aaKnown RBP9.65□□□□□ -0.86
SKA1-201ENST00000285116 SLC36A2Q495M3 483 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 SMARCD3Q6STE5 483 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 LYPD4Q6UWN0 246 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 SHFQ7M4L6 423 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 ASPGQ86U10 573 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 CACUL1Q86Y37 369 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 AMER3Q8N944 861 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 OR2T35Q8NGX2 323 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 MS4A6EQ96DS6 147 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 SECISBP2Q96T21 854 aaKnown RBP9.65□□□□□ -0.86
SKA1-201ENST00000285116 DPYSL5Q9BPU6 564 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 CACNG6Q9BXT2 260 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 IFT46Q9NQC8 304 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 POMT2Q9UKY4 750 aa9.65□□□□□ -0.86
SKA1-201ENST00000285116 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 RNF13O43567 381 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 PRICKLE3O43900 615 aaPredicted RBP9.65□□□□□ -0.87
SKA1-201ENST00000285116 KCNJ13O60928 360 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 SNAPC5O75971 98 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 SOX30O94993 753 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 SYPP08247 313 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 CSNK2A2P19784 350 aaPredicted RBP9.65□□□□□ -0.87
SKA1-201ENST00000285116 CTNNB1P35222 781 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 SRP9P49458 86 aaKnown RBP9.65□□□□□ -0.87
SKA1-201ENST00000285116 INSL4Q14641 139 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 OPCMLQ14982 345 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 POM121L1PQ3SYA9 428 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 C6orf132Q5T0Z8 1188 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 SHEQ5VZ18 495 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 ABHD17CQ6PCB6 329 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 TOMM5Q8N4H5 51 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 SAMD12Q8N8I0 201 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 OR2T33Q8NG76 320 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 OR2A1Q8NGT9 310 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 GIMAP1Q8WWP7 306 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 DACT3Q96B18 629 aaPredicted RBP9.65□□□□□ -0.87
SKA1-201ENST00000285116 GIMAP5Q96F15 307 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 CNRIP1Q96F85 164 aaPredicted RBP9.65□□□□□ -0.87
SKA1-201ENST00000285116 ZNF681Q96N22 645 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 TEX101Q9BY14 249 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 ZNF436Q9C0F3 470 aaPredicted RBP9.65□□□□□ -0.87
SKA1-201ENST00000285116 CRISPLD2Q9H0B8 497 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 EVA1AQ9H8M9 152 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 CD93Q9NPY3 652 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 KLHL28Q9NXS3 571 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 ATPIF1Q9UII2 106 aa9.65□□□□□ -0.87
SKA1-201ENST00000285116 PPIEQ9UNP9 301 aaKnown RBP9.65□□□□□ -0.87
SKA1-201ENST00000285116 A0A1B0GTQ1 180 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 A0A1W2PR48 441 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 IFI6P09912 130 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 GNSP15586 552 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 F8A1P23610 371 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 ATP5A1P25705 553 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms