RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PAFAH1B3Q15102 231 aaKnown RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 PPP1R3AQ16821 1122 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 SOWAHAQ2M3V2 549 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 DBX2Q6ZNG2 339 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 PSMF1Q92530 271 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 OR5B2Q96R09 309 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 SLC25A18Q9H1K4 315 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 RDH14Q9HBH5 336 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 BLACEA4D250 179 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 GPR25O00155 361 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 IL32P24001 234 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 GRB2P62993 217 aaKnown RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 EIF4HQ15056 248 aaKnown RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 TCTE1Q5JU00 501 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 FAM43BQ6ZT52 329 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 LRRC28Q86X40 367 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 CREB3L4Q8TEY5 395 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 PINK1Q9BXM7 581 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 NT5DC2Q9H857 520 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 SLC22A23A1A5C7 686 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 OR2T1O43869 369 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 CBX7O95931 251 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 TBX18O95935 607 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 IL2RGP31785 369 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 STT3AP46977 705 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 NFATC3Q12968 1075 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ELAVL3Q14576 367 aaKnown RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 DYNLRB1Q9NP97 96 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 OLAHQ9NV23 265 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 PPP1R3DO95685 299 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 GGT5P36269 586 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ETV3P41162 512 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 CTXN1P60606 82 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 IRF4Q15306 451 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SLC6A19Q695T7 634 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM139Q8IV31 216 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 DPM1O60762 260 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 RPS17P08708 135 aaKnown RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 GJA5P36382 358 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SOX3P41225 446 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 RBPJQ06330 500 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 PLAG1Q6DJT9 500 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 FAM180BQ6P0A1 224 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 LFNGQ8NES3 379 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 CD99L2Q8TCZ2 262 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 PITHD1Q9GZP4 211 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF355PQ9NSJ1 428 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 DCCP43146 1447 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 AHSGP02765 367 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 RABGGTBP53611 331 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 FAM74A1Q5RGS3 127 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 DPH7Q9BTV6 452 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 PBX4Q9BYU1 374 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ZDHHC18Q9NUE0 388 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 GNG12Q9UBI6 72 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ENPP5Q9UJA9 477 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 EXO1Q9UQ84 846 aaKnown RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SLC22A7Q9Y694 548 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 LEFTY1O75610 366 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 OR10J4P0C629 311 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 GMPRP36959 345 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SLC25A11Q02978 314 aaKnown RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SNTB1Q13884 538 aaKnown RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 GRM2Q14416 872 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 RBMS2Q15434 407 aaKnown RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 OR6F1Q8NGZ6 308 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ZNRF4Q8WWF5 429 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 MTHFD2LQ9H903 347 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 COQ3Q9NZJ6 369 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 PUS1Q9Y606 427 aaKnown RBP eCLIP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 F5P12259 2224 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 NFAT5O94916 1531 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 CT45A10P0DMU9 189 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 POU3F2P20265 443 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 CSNK1A1P48729 337 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ARG2P78540 354 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SERTAD2Q14140 314 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 NDUFAF5Q5TEU4 345 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SLX4IPQ5VYV7 408 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 OR4C11Q6IEV9 310 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 FAM160A2Q8N612 972 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF317Q96PQ6 595 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 EVA1AQ9H8M9 152 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 OBP2BQ9NPH6 170 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 CD1DP15813 335 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 PCGF2P35227 344 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 TRIM23P36406 574 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SHC2P98077 582 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 CTSL3PQ5NE16 218 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 OR4K5Q8NGD3 323 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 M1APQ8TC57 530 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 LMF2Q9BU23 707 aaKnown RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SPATA6Q9NWH7 488 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 FAM163BP0C2L3 166 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 HLA-EP13747 358 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 FLI1Q01543 452 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-201ENST00000282516 MICAQ29983 383 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 C3orf38Q5JPI3 329 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SSX9Q7RTT3 188 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 KDM8Q8N371 416 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms