RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GIMD1P0DJR0 217 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 GLB1P16278 677 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 BMP7P18075 431 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 RPS7P62081 194 aaKnown RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 ZXDAP98168 799 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 MXD1Q05195 221 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 CRYZQ08257 329 aaKnown RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 CACNA1CQ13936 2221 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 NSDHLQ15738 373 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 OCLNQ16625 522 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 TMEM201Q5SNT2 666 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 TMPRSS9Q7Z410 1059 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 CDK20Q8IZL9 346 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 SMAP2Q8WU79 429 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 UCK1Q9HA47 277 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 DNAJB12Q9NXW2 375 aaKnown RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 MED31Q9Y3C7 131 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 IGHV3-20A0A0C4DH32 117 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 STAT5AP42229 794 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 HSD17B7P56937 341 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 GARNL3Q5VVW2 1013 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 LYSMD4Q5XG99 296 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 POMZP3Q6PJE2 187 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 MED25Q71SY5 747 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 PCED1AQ9H1Q7 454 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 OR51V1Q9H2C8 321 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 HINT3Q9NQE9 182 aaKnown RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 CHCHD3Q9NX63 227 aaKnown RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 IL20Q9NYY1 176 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 H2AFY2Q9P0M6 372 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 RPS6KB2Q9UBS0 482 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 MKL2Q9ULH7 1088 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 SPIN1Q9Y657 262 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 CDH10Q9Y6N8 788 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 RAB36O95755 333 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 PSMD7P51665 324 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 EFNA3P52797 238 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 INAQ16352 499 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 EXOSC6Q5RKV6 272 aaKnown RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 GUSBP11Q6P575 273 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 CYP4Z2PQ8N1L4 340 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 OR52L1Q8NGH7 329 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 NR4A3Q92570 626 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 MND1Q9BWT6 205 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 NXF5Q9H1B4 397 aaKnown RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 ANKRD19PQ9H560 264 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 SURF4O15260 269 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 PRODHO43272 600 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 GPX5O75715 221 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 NGFRP08138 427 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 FXYD6P3P58550 94 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 NCF4Q15080 339 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 KIRREL2Q6UWL6 708 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 OR51G2Q8NGK0 314 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 PTPMT1Q8WUK0 201 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 ADOQ96SZ5 270 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 KCNS3Q9BQ31 491 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 LMF2Q9BU23 707 aaKnown RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 TEX12Q9BXU0 123 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 SLIRPQ9GZT3 109 aaKnown RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 KRCC1Q9NPI7 259 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 TESQ9UGI8 421 aaKnown RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 CLDN25C9JDP6 229 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 GYPBP06028 91 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 NOS3P29474 1203 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 C1DQ13901 141 aaKnown RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF791Q3KP31 576 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 BMP8AQ7Z5Y6 402 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 PHOSPHO1Q8TCT1 267 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF285Q96NJ3 590 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 HCAR1Q9BXC0 346 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 TTTY10Q9BZA0 68 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 DUSP15Q9H1R2 295 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-201ENST00000279247 LANCL2Q9NS86 450 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 CTSFQ9UBX1 484 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 EPHA6Q9UF33 1036 aa16.54■□□□□ 0.24
CAPN1-201ENST00000279247 PIPP12273 146 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-201ENST00000279247 BMP4P12644 408 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 TGM4P49221 684 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 SHBQ15464 509 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 MEDAGQ5VYS4 303 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 LRRC17Q8N6Y2 441 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 TRMT61AQ96FX7 289 aaKnown RBP16.53■□□□□ 0.24
CAPN1-201ENST00000279247 H0YIG0 161 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 MRPL3P09001 348 aaKnown RBP16.53■□□□□ 0.24
CAPN1-201ENST00000279247 CLUP10909 449 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 FBLP22087 321 aaKnown RBP16.53■□□□□ 0.24
CAPN1-201ENST00000279247 ACAA2P42765 397 aaKnown RBP16.53■□□□□ 0.24
CAPN1-201ENST00000279247 MADCAM1Q13477 382 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 LANCL3Q6ZV70 420 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 OAFQ86UD1 273 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF615Q8N8J6 731 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 OR9Q1Q8NGQ5 310 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 THAP3Q8WTV1 239 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-201ENST00000279247 SNRNP27Q8WVK2 155 aaKnown RBP16.53■□□□□ 0.24
CAPN1-201ENST00000279247 HS6ST2Q96MM7 605 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 TNFRSF13CQ96RJ3 184 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 RACGAP1Q9H0H5 632 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF304Q9HCX3 659 aa16.53■□□□□ 0.24
CAPN1-201ENST00000279247 DRD5P21918 477 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms