RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PIPOXQ9P0Z9 390 aa11.96□□□□□ -0.49
HERC6-202ENST00000273960 STOX2Q9P2F5 926 aaPredicted RBP11.96□□□□□ -0.49
HERC6-202ENST00000273960 ASF1AQ9Y294 204 aa11.96□□□□□ -0.49
HERC6-202ENST00000273960 GBF1Q92538 1859 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 PLSCR5A0PG75 271 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 CCL16O15467 120 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 SIGLEC6O43699 453 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 C8GP07360 202 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 SPP1P10451 314 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 CCL5P13501 91 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 HAAOP46952 286 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 ZNF750Q32MQ0 723 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 TP53I3Q53FA7 332 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 ZDHHC20Q5W0Z9 365 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 CRTC1Q6UUV9 634 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 CXXC5Q7LFL8 322 aaKnown RBP11.96□□□□□ -0.5
HERC6-202ENST00000273960 NRMQ8IXM6 262 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 STK35Q8TDR2 534 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 TRMT61BQ9BVS5 477 aaKnown RBP11.96□□□□□ -0.5
HERC6-202ENST00000273960 HCAR1Q9BXC0 346 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 BCL2L14Q9BZR8 327 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 BHLHE41Q9C0J9 482 aaPredicted RBP11.96□□□□□ -0.5
HERC6-202ENST00000273960 BTBD1Q9H0C5 482 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 TMEM38AQ9H6F2 299 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 HRASLSQ9HDD0 168 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 FBXL4Q9UKA2 621 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 ASB4Q9Y574 426 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 PTPRDP23468 1912 aa11.96□□□□□ -0.5
HERC6-202ENST00000273960 FABP1P07148 127 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 FGF2P09038 288 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 APEHP13798 732 aaKnown RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 BMP8BP34820 402 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 CTSOP43234 321 aaPredicted RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 UBE2IP63279 158 aaKnown RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 LASP1Q14847 261 aaKnown RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 LTB4RQ15722 352 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 GPR33Q49SQ1 333 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 LIPJQ5W064 366 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 BMP8AQ7Z5Y6 402 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 NKAIN4Q8IVV8 208 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 PM20D2Q8IYS1 436 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 ZNF461Q8TAF7 563 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 HAVCR2Q8TDQ0 301 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 NSMAFQ92636 917 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 TMEM159Q96B96 161 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 C4orf36Q96KX1 117 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 ZNF354BQ96LW1 612 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 ZNF75AQ96N20 296 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 ZNF607Q96SK3 696 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 MRPL17Q9NRX2 175 aaKnown RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 ASF1BQ9NVP2 202 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 GLS2Q9UI32 602 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 TSPAN6O43657 245 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 CREBL2O60519 120 aaPredicted RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 APOC1P02654 83 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 THBS2P35442 1172 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 SNRPEP62304 92 aaKnown RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 GGTA1PQ4G0N0 100 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 ARL14Q8N4G2 192 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 ABHD4Q8TB40 342 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 CHFRQ96EP1 664 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 F2RL3Q96RI0 385 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 GPR174Q9BXC1 333 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 SYNPO2LQ9H987 977 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 BABAM2Q9NXR7 383 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 KCND3Q9UK17 655 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 LSM7Q9UK45 103 aaKnown RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 SLC6A5Q9Y345 797 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 PCDHGA5Q9Y5G8 931 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 PPM1DO15297 605 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 RAB13P51153 203 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 CCR9P51686 369 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 ADGRF1Q5T601 910 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 YOD1Q5VVQ6 348 aaPredicted RBP11.95□□□□□ -0.5
HERC6-202ENST00000273960 CD200R1LQ6Q8B3 271 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 ACBD7Q8N6N7 88 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 PXT1Q8NFP0 134 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 C1orf216Q8TAB5 229 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 FATE1Q969F0 183 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 FBXL3Q9UKT7 428 aa11.95□□□□□ -0.5
HERC6-202ENST00000273960 LOC100509620A0A075B734 347 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 B4GALT2O60909 372 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ZNF254O75437 659 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 RASGRP1O95267 797 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 GABRA1P14867 456 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 PSMB10P40306 273 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 GCGRP47871 477 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 RFX3P48380 749 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 TDGQ13569 410 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 CAMK1Q14012 370 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ODF4Q2M2E3 257 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 KIAA1211LQ6NV74 962 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 CMIPQ8IY22 773 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 CMTM8Q8IZV2 173 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ZNF614Q8N883 585 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 OR4D10Q8NGI6 311 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 GHSRQ92847 366 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 OTUB2Q96DC9 234 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 SPATA5L1Q9BVQ7 753 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ZNF471Q9BX82 626 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms