RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 TRIM63Q969Q1 353 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 HDAC8Q9BY41 377 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 HHATLQ9HCP6 504 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 ALKBH4Q9NXW9 302 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 ERVK-11Q9UQG0 969 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 OC90Q02509 493 aaPredicted RBP13.6□□□□□ -0.23
CNOT9-201ENST00000273064 ELOCQ15369 112 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 KCNJ8Q15842 424 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 TMEM44Q2T9K0 475 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 PRAMEF17Q5VTA0 474 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 TMEM53Q6P2H8 277 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 Q6ZS52 159 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 TMEM163Q8TC26 289 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 LMF1Q96S06 567 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 CKLFQ9UBR5 152 aa13.6□□□□□ -0.23
CNOT9-201ENST00000273064 SLC22A31A6NKX4 558 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 SLC1A3P43003 542 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 PPP1CAP62136 330 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 PLCXD2Q0VAA5 305 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 GBX1Q14549 363 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 KIR2DS3Q14952 304 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 NUP54Q7Z3B4 507 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 TMEM151BQ8IW70 566 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 TBC1D20Q96BZ9 403 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 CHST8Q9H2A9 424 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 NUDT15Q9NV35 164 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 GPR55Q9Y2T6 319 aaPredicted RBP13.59□□□□□ -0.23
CNOT9-201ENST00000273064 KRT33AO76009 404 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 ST6GAL1P15907 406 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
CNOT9-201ENST00000273064 MPEG1Q2M385 716 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 BTBD16Q32M84 506 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 TBC1D25Q3MII6 688 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 LRRC37A5PQ49AS3 106 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 ACSM3Q53FZ2 586 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 RASGRP3Q8IV61 690 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 GID4Q8IVV7 300 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 ZNF619Q8N2I2 560 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 OR5W2Q8NH69 310 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 DYNC2LI1Q8TCX1 351 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 RFT1Q96AA3 541 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 CACNG6Q9BXT2 260 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 UBQLN3Q9H347 655 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 FBXO34Q9NWN3 711 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 METTL15A6NJ78 407 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 MAN2B1O00754 1011 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 CD2P06729 351 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 CLUP10909 449 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 SLC6A9P48067 706 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 BTG2P78543 158 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 DPTQ07507 201 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 TSPAN31Q12999 210 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 AGERQ15109 404 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 MFSD12Q6NUT3 480 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 IL17RCQ8NAC3 791 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 PHOSPHO2Q8TCD6 241 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 MRGPRX1Q96LB2 322 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 SLC6A20Q9NP91 592 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 ADAM18Q9Y3Q7 739 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 ARHGEF17Q96PE2 2063 aaPredicted RBP13.59□□□□□ -0.23
CNOT9-201ENST00000273064 MAKP20794 623 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 MAGEA2P43356 314 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 PRKXP51817 358 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 CHAF1BQ13112 559 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 SNTB2Q13425 540 aaKnown RBP13.59□□□□□ -0.23
CNOT9-201ENST00000273064 NTRK2Q16620 822 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 C4orf46Q504U0 113 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 SLC35D2Q76EJ3 337 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 LYSMD2Q8IV50 215 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 TRMT10AQ8TBZ6 339 aaKnown RBP13.59□□□□□ -0.23
CNOT9-201ENST00000273064 ITFG2Q969R8 447 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 SLC6A18Q96N87 628 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 SERTAD3Q9UJW9 196 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 TMEM5Q9Y2B1 443 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 CDH10Q9Y6N8 788 aa13.59□□□□□ -0.23
CNOT9-201ENST00000273064 LAMA3Q16787 3333 aa13.58□□□□□ -0.23
CNOT9-201ENST00000273064 M0R082 166 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 LILRB3O75022 631 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 EML2O95834 649 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 GP1BBP13224 206 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 ZP2Q05996 745 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 MLF2Q15773 248 aaPredicted RBP13.58□□□□□ -0.24
CNOT9-201ENST00000273064 GKN2Q86XP6 184 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 PHC2Q8IXK0 858 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 MINDY2Q8NBR6 621 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 HINT3Q9NQE9 182 aaKnown RBP13.58□□□□□ -0.24
CNOT9-201ENST00000273064 GPATCH2Q9NW75 528 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 TAS2R10Q9NYW0 307 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 COQ3Q9NZJ6 369 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 CNOT2Q9NZN8 540 aaKnown RBP13.58□□□□□ -0.24
CNOT9-201ENST00000273064 ZNF69Q9UC07 566 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 FBXL3Q9UKT7 428 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 PPIL1Q9Y3C6 166 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 TRBV5-3A0A0A0MS03 114 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 IGHV3-20A0A0C4DH32 117 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 AGAP14A8MT82 685 aa13.58□□□□□ -0.24
CNOT9-201ENST00000273064 CASC3O15234 703 aaKnown RBP13.58□□□□□ -0.24
CNOT9-201ENST00000273064 SNRPBP14678 240 aaKnown RBP13.58□□□□□ -0.24
CNOT9-201ENST00000273064 PKLRP30613 574 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms