RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 C10orf107Q8IVU9 208 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 WDR75Q8IWA0 830 aaKnown RBP7.95□□□□□ -1.14
TPM3-201ENST00000271850 TUSC5Q8IXB3 177 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 ZNF619Q8N2I2 560 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 KBTBD8Q8NFY9 601 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 OSTF1Q92882 214 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 CDS1Q92903 461 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 ZBTB8AQ96BR9 441 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 KLHL15Q96M94 604 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 CCT7Q99832 543 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 GATA5Q9BWX5 397 aaPredicted RBP7.95□□□□□ -1.14
TPM3-201ENST00000271850 OR10A4Q9H209 315 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 SERHL2Q9H4I8 314 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 REEP4Q9H6H4 257 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 CXorf36Q9H7Y0 433 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 ANKZF1Q9H8Y5 726 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 GPATCH2Q9NW75 528 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 C1orf109Q9NX04 203 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 GIN1Q9NXP7 522 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 KCNE5Q9UJ90 142 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 ICAM5Q9UMF0 924 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 LAMP3Q9UQV4 416 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 GPR52Q9Y2T5 361 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 DNAJC15Q9Y5T4 150 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 MAGED1Q9Y5V3 778 aaPredicted RBP7.95□□□□□ -1.14
TPM3-201ENST00000271850 PLCE1Q9P212 2302 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 NUP214P35658 2090 aaPredicted RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 ALPK2Q86TB3 2170 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 CCDC151A5D8V7 595 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 DPRXA6NFQ7 191 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 TTC36A6NLP5 189 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 ETV2O00321 342 aaPredicted RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 BCAS1O75363 584 aaPredicted RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 CRLF1O75462 422 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 H6PDO95479 791 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 IGHV4-39P01824 125 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 HMGN2P05204 90 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 TUBBP07437 444 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 LINC00032P0C843 101 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 LAMP1P11279 417 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 BCKDHAP12694 445 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 ENPP1P22413 925 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 CRHR1P34998 444 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 CDKN1AP38936 164 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 GATA4P43694 442 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 CLK3P49761 638 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 MANFP55145 182 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 ATP5J2P56134 94 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 CTBP2P56545 445 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 PLAURQ03405 335 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 LASP1Q14847 261 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 KLHL26Q53HC5 615 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 LIPMQ5VYY2 423 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 BEND4Q6ZU67 534 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 LILRA2Q8N149 483 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 CEP112Q8N8E3 955 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 OR7A2PQ8NGA2 310 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 B4GALNT2Q8NHY0 566 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 FBXO27Q8NI29 283 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 EPS8L3Q8TE67 593 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 TMEM171Q8WVE6 324 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 ZNF75CPQ92670 426 aaPredicted RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 PPCDCQ96CD2 204 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 METTL2AQ96IZ6 378 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 C3orf30Q96M34 536 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 PSD2Q9BQI7 771 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 PRRG4Q9BZD6 226 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 C3orf14Q9HBI5 128 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 RRAGDQ9NQL2 400 aaPredicted RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 ACSS1Q9NUB1 689 aaPredicted RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 NPAP1Q9NZP6 1156 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 KLHL13Q9P2N7 655 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 DCDC2Q9UHG0 476 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 ATP6V1HQ9UI12 483 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 PRSS50Q9UI38 385 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 MRTO4Q9UKD2 239 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 MCTS1Q9ULC4 181 aaKnown RBP7.94□□□□□ -1.14
TPM3-201ENST00000271850 FIS1Q9Y3D6 152 aa7.94□□□□□ -1.14
TPM3-201ENST00000271850 A0A1W2PNR3 127 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 SHISA9B4DS77 424 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 ZNF195O14628 629 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 AZIN1O14977 448 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 SCAMP2O15127 329 aaKnown RBP7.93□□□□□ -1.14
TPM3-201ENST00000271850 RAMP1O60894 148 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 PLGP00747 810 aaPredicted RBP7.93□□□□□ -1.14
TPM3-201ENST00000271850 ADAP00813 363 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 CPA3P15088 417 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 PRKCAP17252 672 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 ELK4P28324 431 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 NTF4P34130 210 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 ACVR1BP36896 505 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 ZNF41P51814 821 aaPredicted RBP7.93□□□□□ -1.14
TPM3-201ENST00000271850 PTGR1Q14914 329 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 MLC1Q15049 377 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 CLEC12BQ2HXU8 276 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 CCDC153Q494R4 210 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 ZNF672Q499Z4 452 aaPredicted RBP7.93□□□□□ -1.14
TPM3-201ENST00000271850 XKR7Q5GH72 579 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 SFRP5Q5T4F7 317 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms